Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00933 ATGCCGAGAATGAAGCATCTACTCAGAAAACTTCATATCGGTGGTGGTATAAATGATCACCAGAGATTATCGCCTGAGACTCGCCCAGTGCTCAGCCCCACTCCTAGTCTCAATTTAACTTCTTCTGCTTTGCCGTCCCCTACAACAATGCCTACCGTCACTGCAACTGAATCGGTTGCTGATCGGACGGCTGATGATGTTACCACCGGCGTTAGTGGCGACAAGGGAGTGGACTTCAATCTCTTGGAGGAGGAGTTTCAGATGCAGATGGCTCTGGCAATTAGTGCTTCTGATTCTGATGTCCGCAAGGACCCCGATTCTGCTCAGATCGATGCTGCCAAGCAGATGAGCCTCGGGTGTCAAACTTCTGTAACTGACACCGAATCCCTTGTCCAGTTTCAATCTCTTCGTTACTGGAACTATAGTGTCATTGACTACGAAGAGAAAGTGATGGATGGATTTTATGATGTTTATGGCATCACCTCAAATTTAGTTGAACGAGGAAGGATGCCATTGTTGGTTGATCTGCAAACTATATCCATATCAGAAAATCTTGATTATGAAGTGATATTGGTGAACCGCATGGTTGATACTGAGCTGAAGCAGCTTGAGAAGAAAGCCCATAAATTATCTAAGAACTCCCACTTTTCTCAACAAGGACTAATGTTAAGTGGCCTACTTCAGAAACTTGCTGACATTGTTGTTGATAGAATGGGCGGGCCAGTTGGTGATGCTGATGAAGTTTTGAAAAGGTGGACCATGAGGAGCCGTGAGTTAAGAAGTTCCTTAAGAACCATTACTCTTCCCATTGGCTGTCTTGATGTAGGACTTTCACGTCACCGTGCCCTACTTTTCAAGGTACTTGCAGATAGAATGAATGTTCCCTGTATGCTGGTCAAAGGGAGTTATTACACTGGAACTGATGATGGAGCTGTGAATTTGATCAAAGCTGATGATGGAAGTGAATTCATTATTGATCTGATGGGCGCTCCTGGTGCTCTTATTCCTGCCGAAGTACCCAGCAGTCAGCTCCAAAACTACAGTTTACCTGTAAGGGGCTGTGCAGATATTGTGGAGGTACCAAAAAACACACATTTGATGTTAGATGATGGAAGTAGAATGCTGGCAGTCTCATCTGATCTTGGAAGATGTTCAACAGTAGGCAACACTTGGCCAGAAGAATTAATAAATGTTGACAGTAGAAAAATTCCAGTTGAAAGGATTTCTGTTGGAGGAAATCAAACAGAGAGGTTTGGACATGAGTTTGTGAATCATCTTCAGTCAGTGCAGAAGTCAGGTGAAAGCTCTTCACATGCAAAAGCATCCCCTGCAGAAAAAAAGCAAGTGAAAGATGTATCAAAAGGGCCAGGTTTCGTTCAAAAATTACACACTGTTCAATTAGAAAATTGTGCCCTACCTTCATCTGAGCTCTCTTCACATAAAAATTCACAAAATACAGCTCAAGATAAAGCATTCAAAGATTTTCCTCAGGTTAGTGAAAATAATATTGAAACTTCTGTTCAAGCTGGTCCAGATAACGCGTTATCAAGCTATGAAAAGTCTGTCAAATCCCCTCAAGGGGTGTCCTCTGCAAGTGATAATATGAGGAAGGTGTCTGTTTCTTTTTGTAATGGAATTGAAGAATTGGAGCACCTAGAAGCATTAAATATGGATAGTGCTCCATCCAATCCTCATCAGAAGCATGAAGAGCAATTTCTTGAGTTGTCCTTGCCTAAAGCAGCCGTGTCTTGCAAAAGACCAAGTGGGGTTAACTTTGCTCATGACGATGACGATGACGAAAATCTTCTTAATGATAACGTTGGGGGGGCTTTTAATAACACTGAATTGGATAAGGATTCTACCGTTCAATTAAATGAAACAGCTAAAGGAGATCACTCTAAGTATGATGGTAAAAGTGAGAAAGTTAATGCAGTTCTCGGGGAGAGCACAGAATGGGAGATTCAATGGGAGGATCTTCAAATTGGTGAGCGAATTGGTATTGGTTCTTATGGTGAGGTCTATCATGCTGACTTGAAAGGCACTGAAGTTGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCTGGTGATGCATTGGCTCAGTTTAAATCTGAAGTTGAGATAATGTTGAGACTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGGCCCCCACATTCTTCTATCTTGACAGAGTTTCTTCCTAGAGGAAGTCTATATAGGCTATTACATCGACCCAATTTTCGAATTGAAGAGAAGAGGCGGTTGCGTATGGCTTTTGATGTGGCTAAGGGAATGAATTACTTGCACACAAGCCATCCTCCCATTGTCCATCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAAAATTGGGTTGTTAAGGTATGTGATTTTGGCTTGTCACGCATGAAGCACCATACCTTTTTGTCTTCAAAGTCTACTGCTGGAACGCCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGATGTATATAGTTTTGGTGTGATTTTGTGGGAGTTGACTACCACAAAGATCCCATGGAAGGGGTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGGTTTCAAAATAGACGGCTTGAAATTCCAGAAGATGTTGATCCTGTGGTATCACAAATTATATGTGATTGTTGGCAAACGGACCCACACTCGCGACCGTCATTCTCGCAGATCATGTCTCGTCTCCGCCACCTTCGACGCCTGGTTGTTAGACCAACAGATCCAACTGAAAAATCAAATGAAGTTGTCCGTATTAGAGAGCAACTGAGATAA 2820 0.4266 MPRMKHLLRKLHIGGGINDHQRLSPETRPVLSPTPSLNLTSSALPSPTTMPTVTATESVADRTADDVTTGVSGDKGVDFNLLEEEFQMQMALAISASDSDVRKDPDSAQIDAAKQMSLGCQTSVTDTESLVQFQSLRYWNYSVIDYEEKVMDGFYDVYGITSNLVERGRMPLLVDLQTISISENLDYEVILVNRMVDTELKQLEKKAHKLSKNSHFSQQGLMLSGLLQKLADIVVDRMGGPVGDADEVLKRWTMRSRELRSSLRTITLPIGCLDVGLSRHRALLFKVLADRMNVPCMLVKGSYYTGTDDGAVNLIKADDGSEFIIDLMGAPGALIPAEVPSSQLQNYSLPVRGCADIVEVPKNTHLMLDDGSRMLAVSSDLGRCSTVGNTWPEELINVDSRKIPVERISVGGNQTERFGHEFVNHLQSVQKSGESSSHAKASPAEKKQVKDVSKGPGFVQKLHTVQLENCALPSSELSSHKNSQNTAQDKAFKDFPQVSENNIETSVQAGPDNALSSYEKSVKSPQGVSSASDNMRKVSVSFCNGIEELEHLEALNMDSAPSNPHQKHEEQFLELSLPKAAVSCKRPSGVNFAHDDDDDENLLNDNVGGAFNNTELDKDSTVQLNETAKGDHSKYDGKSEKVNAVLGESTEWEIQWEDLQIGERIGIGSYGEVYHADLKGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPHSSILTEFLPRGSLYRLLHRPNFRIEEKRRLRMAFDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTTKIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPVVSQIICDCWQTDPHSRPSFSQIMSRLRHLRRLVVRPTDPTEKSNEVVRIREQLR 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00933 939 Gene3D Transferase(Phosphotransferase) domain 1 738 920 - -
Accr4g00933 939 FunFam Serine/threonine-protein kinase isoform 1 649 737 - -
Accr4g00933 939 MobiDBLite consensus disorder prediction 16 51 - -
Accr4g00933 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Accr4g00933 939 FunFam Serine/threonine-protein kinase CTR1 738 921 - -
Accr4g00933 939 Gene3D Phosphorylase Kinase; domain 1 652 736 - -
Accr4g00933 939 ProSitePatterns Protein kinases ATP-binding region signature. 665 687 IPR017441 GO:0005524
Accr4g00933 939 MobiDBLite consensus disorder prediction 25 51 - -
Accr4g00933 939 SMART serkin_6 659 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00933 939 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 920 - -
Accr4g00933 939 PRINTS Tyrosine kinase catalytic domain signature 819 829 IPR001245 GO:0004672|GO:0006468
Accr4g00933 939 PRINTS Tyrosine kinase catalytic domain signature 772 790 IPR001245 GO:0004672|GO:0006468
Accr4g00933 939 PRINTS Tyrosine kinase catalytic domain signature 882 904 IPR001245 GO:0004672|GO:0006468
Accr4g00933 939 PRINTS Tyrosine kinase catalytic domain signature 733 746 IPR001245 GO:0004672|GO:0006468
Accr4g00933 939 PRINTS Tyrosine kinase catalytic domain signature 838 860 IPR001245 GO:0004672|GO:0006468
Accr4g00933 939 Pfam Protein tyrosine and serine/threonine kinase 659 911 IPR001245 GO:0004672|GO:0006468
Accr4g00933 939 CDD STKc_MAP3K-like 665 911 - -
Accr4g00933 939 SUPERFAMILY Protein kinase-like (PK-like) 648 911 IPR011009 -
Accr4g00933 939 Pfam Ethylene-responsive protein kinase Le-CTR1 132 335 - -
Accr4g00933 939 ProSiteProfiles Protein kinase domain profile. 659 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00933 939 Coils Coil 193 213 - -
Accr4g00933 939 MobiDBLite consensus disorder prediction 428 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00933 Accr-Chr4 8907423 8915871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00933 1 917 MAP Kinase Kinase Kinase AT5G11850 53.830 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Accr4g00933 PK_Tyr_Ser-Thr 1.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00933 K04424 - qsa:O6P43_015906 1093.57