Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00932 ATGGATATCGGAAAACAACGCCAGCATGATCAAGAGGCAGATATGGATGATTGGAGCAGTGTTCGTGTCCCTAAACATGAAAAGGACAAAGAAGAAATCAACAGAAGCAGCATCAGTGGTCACAAGGATTCTTCATCAGCAAAATGGAAGTGTTCAGATCAGATGTGGGTGATGCGAAAATCGAAGGAATGTCAAAAGGCATCAAGTTATAGTCCAACATGGCAACAATACCAACGAGGACGACGGCCCTCTAATAACACCAATAGGGTTTGCTCAGATTGCAGCACAACCAGTACTCCACTTTGGAGGAGTGGCCCTAATGGTCCCAAGTCACTTTGCAATGCGTGTGGGATTAGGCAGAGAAAAGCAAGAAAGGCAATGGAAGCAGAAGGTCGTGGATGGTGTGCAAAGACCAGAATAATGCACAATAACAAGAGGCAAGTAATGAAGAACAAAACTGATTATGAGTGTCGAGGGAAAATGAAAGTGACTCTCCGGGATTTTGAATTCACTTTTAGCAGAAACTCCGTCGTTTTTCAGCAACTAGTGTTCCCACGGGATGAAGTAATTGAAGGGGCAATGCTTCTCATGGATTTATCTTATGGCCTTTTTCCCTTCTAG 621 0.438 MDIGKQRQHDQEADMDDWSSVRVPKHEKDKEEINRSSISGHKDSSSAKWKCSDQMWVMRKSKECQKASSYSPTWQQYQRGRRPSNNTNRVCSDCSTTSTPLWRSGPNGPKSLCNACGIRQRKARKAMEAEGRGWCAKTRIMHNNKRQVMKNKTDYECRGKMKVTLRDFEFTFSRNSVVFQQLVFPRDEVIEGAMLLMDLSYGLFPF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00932 206 Gene3D - 85 156 IPR013088 GO:0006355|GO:0008270
Accr4g00932 206 Pfam GATA zinc finger 91 125 IPR000679 GO:0006355|GO:0043565
Accr4g00932 206 MobiDBLite consensus disorder prediction 1 38 - -
Accr4g00932 206 ProSiteProfiles GATA-type zinc finger domain profile. 85 121 IPR000679 GO:0006355|GO:0043565
Accr4g00932 206 CDD ZnF_GATA 90 122 IPR000679 GO:0006355|GO:0043565
Accr4g00932 206 MobiDBLite consensus disorder prediction 68 89 - -
Accr4g00932 206 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 82 132 - -
Accr4g00932 206 ProSitePatterns GATA-type zinc finger domain. 91 116 IPR000679 GO:0006355|GO:0043565
Accr4g00932 206 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 16 203 - -
Accr4g00932 206 SMART GATA_3 85 132 IPR000679 GO:0006355|GO:0043565
Accr4g00932 206 MobiDBLite consensus disorder prediction 1 46 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00932 20 120 C2C2-Gata Transcription Factor Family AT4G26150 38.596 5.77e-17 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr4g00932 GATA 5e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00932 - - pcin:129298038 130.183