Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00921 ATGGAGGGAGTGACAGTGAAGGTTGAAGAGACGGTGGCATGTGGAGCTGTTTCTTCATCTTCGCCTTCATCTTCGGCTTCAAGCCTCTCTCCTCGCCCTATGGAAGGGCTTCACGAGATGGGGCCTCCTCCATTTCTTATGAAGACTTTTGAAATGGTGGAGGACCCATCCACCGACTCTGTTGTTTCTTGGAGCCTTGCTCGTAACAGCTTCATTGTTTGGGACTCTCACAAGTTCTCCACTGCTATTCTTCCTCGCTACTTCAAGCACAGTAATTTTTCCAGCTTCATTCGCCAGCTCAACACCTATGGATTTAGAAAAGTTGATCCTGATCGATGGGAATTTGCAAACGAAGGGTTTTTGGGTGGACAGAGACATTTGTTGAAGACAATTAAGAGAAGAAGAAATGTGTCTCAGTGTGTACAGCAAGAACGAGGAATTTCTTGTGTTGAATTGGGACAATACGGATTGGAAGGCGAGCTTGACAGGTTGAGAAGAGACAGGTCGGTGATCATGGCCGAAATTGTGAAATTGAGACAGCATCAGCAGAATTCACGGGCGCAACTGATTGCGATGGAGGACAGATTACAAACCACAGAGAAGAAACAGCAACAGATACTCACTTTCCTTGCCAAAGCACTGAAAAACCGAACTTTTATCCAACAATTTGCCCAGAAAAATGCCCAAAACAATGAATTACTTGGTGTTGATATCAGGAGAAAGAGGAGACTAACTGCTAGCCCAAGTGTGGAGAACTTACAGGATGATCCTGTGACAGTGGCAGTGCTGAGTGAACCAGTTGTTGACTATTCAACAAATGAACAGGAAGAATTGGCAACCATAGAGTCGGAGATAGAGACTTTTTTTTCAGCTCCTCATGATAATGAATCAAGCAGTGACAAGAAAGAACCAGCATCTAGTTCAATTCCTAAAACTAGCGGGAGCAATCTGGGTTCACTGAGTGATGCAATATGGGAGGATTTGCTGAGTGAAGACTTAGTTCACGGCAATCCAGAGGAGGAAATTATATTTGGTGATCAGTCCCAAACTGATGCTCCAGTTGAAGACTTGGTAGCAAAGTCTCATGAGTGGGCTTCAGGTTTGAAGGACTTGGTAGATCAATTGGGTTATCTTGGGTCCAAACCATAG 1149 0.4456 MEGVTVKVEETVACGAVSSSSPSSSASSLSPRPMEGLHEMGPPPFLMKTFEMVEDPSTDSVVSWSLARNSFIVWDSHKFSTAILPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRHLLKTIKRRRNVSQCVQQERGISCVELGQYGLEGELDRLRRDRSVIMAEIVKLRQHQQNSRAQLIAMEDRLQTTEKKQQQILTFLAKALKNRTFIQQFAQKNAQNNELLGVDIRRKRRLTASPSVENLQDDPVTVAVLSEPVVDYSTNEQEELATIESEIETFFSAPHDNESSSDKKEPASSSIPKTSGSNLGSLSDAIWEDLLSEDLVHGNPEEEIIFGDQSQTDAPVEDLVAKSHEWASGLKDLVDQLGYLGSKP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00921 382 MobiDBLite consensus disorder prediction 17 31 - -
Accr4g00921 382 Coils Coil 182 202 - -
Accr4g00921 382 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 290 IPR027725 -
Accr4g00921 382 MobiDBLite consensus disorder prediction 17 38 - -
Accr4g00921 382 FunFam Heat shock transcription factor 1 38 135 - -
Accr4g00921 382 MobiDBLite consensus disorder prediction 291 318 - -
Accr4g00921 382 Gene3D - 38 135 IPR036388 -
Accr4g00921 382 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00921 382 SUPERFAMILY "Winged helix" DNA-binding domain 41 134 IPR036390 -
Accr4g00921 382 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00921 382 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00921 382 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00921 382 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00921 382 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00921 382 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00921 Accr-Chr4 8766208 8767752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00921 31 382 HSF AT2G26150 52.113 1.05e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr4g00921 HSF_DNA-bind 3.1e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00921 K09419 - tcc:18588081 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00921 4 8766208 8767752 Accr4g00921 4 8766208 8767752 ECH