Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00920 ATGGAGGGAGTGACAGTGAAGGTTGAAGAGACGGTGGCATGTGGAGCTGTTTCTTCATCTTCGCCTTCATCTTCGGCTTCAAGCCTCTCTCCTCGCCCTATGGAAGGGCTTCACGAGATGGGGCCTCCTCCATTTCTTATGAAGACTTTTGAAATGGTGGAGGACCCATCCACCGACTCTGTTGTTTCTTGGAGCCTTGCTCGTAACAGCTTCATTGTTTGGGACTCTCACAAGTTCTCCACTGCTATTCTTCCTCGCTACTTCAAGCACAGTAATTTTTCCAGCTTCATTCGCCAGCTCAACACCTATGGATTTAGAAAAGTTGATCCTGATCGATGGGAATTTGCAAACGAAGGGTTTTTGGGTGGACAGAGACATTTGTTGAAGACAATTAAGAGAAGAAGAAATGTGTCTCAGTGTGTACAGCAAGAACGAGGAATTTCTTGTGTTGAATTGGGACAATACGGATTGGAAGGCGAGCTTGACAGGTTGAGAAGAGACAGGTCGGTGATCATGGCCGAAATTGTGAAATTGAGACAGCATCAGCAGAATTCACGGGCGCAACTGATTGCGATGGAGGACAGATTACAAACCACAGAGAAGAAACAGCAACAGATACTCACTTTCCTTGCCAAAGCACTGAAAAACCGAACTTTTATCCAACAATTTGCCCAGAAAAATGCCCAAAACAATGAATTACTTGGTGTTGATATCAGGAGAAAGAGGAGACTAACTGCTAGCCCAAGTGTGGAGAACTTACAGGATGATCCTGTGACAGTGGCAGTGCTGAGTGAACCAGTTGTTGACTATTCAACAAATGAACAGGAAGAATTGGCAACCATAGAGTCGGAGATAGAGACTTTTTTTTCAGCTCCTCATGATAATGAATCAAGCAGTGACAAGAAAGAACCAGCATCTAGTTCAATTCCTAAAACTAGCGGGAGCAATCTGGGTTCACTGAGTGATGCAATATGGGAGGATTTGCTGAGTGAAGACTTAGTTCACGGCAATCCAGAGGAGGAAATTATATTTGGTGATCAGTCCCAAACTGATGCTCCAGTTGAAGACTTGGTAGCAAAGTCTCATGAGTGGGCTTCAGGCTTGCATTCTCATGTAGACAAAGCTGGGTAA 1131 0.4465 MEGVTVKVEETVACGAVSSSSPSSSASSLSPRPMEGLHEMGPPPFLMKTFEMVEDPSTDSVVSWSLARNSFIVWDSHKFSTAILPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRHLLKTIKRRRNVSQCVQQERGISCVELGQYGLEGELDRLRRDRSVIMAEIVKLRQHQQNSRAQLIAMEDRLQTTEKKQQQILTFLAKALKNRTFIQQFAQKNAQNNELLGVDIRRKRRLTASPSVENLQDDPVTVAVLSEPVVDYSTNEQEELATIESEIETFFSAPHDNESSSDKKEPASSSIPKTSGSNLGSLSDAIWEDLLSEDLVHGNPEEEIIFGDQSQTDAPVEDLVAKSHEWASGLHSHVDKAG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00920 376 MobiDBLite consensus disorder prediction 17 31 - -
Accr4g00920 376 Coils Coil 182 202 - -
Accr4g00920 376 MobiDBLite consensus disorder prediction 17 38 - -
Accr4g00920 376 MobiDBLite consensus disorder prediction 291 318 - -
Accr4g00920 376 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00920 376 SUPERFAMILY "Winged helix" DNA-binding domain 41 134 IPR036390 -
Accr4g00920 376 Gene3D - 38 135 IPR036388 -
Accr4g00920 376 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00920 376 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00920 376 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00920 376 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr4g00920 376 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 290 IPR027725 -
Accr4g00920 376 FunFam Heat shock transcription factor 1 38 135 - -
Accr4g00920 376 MobiDBLite consensus disorder prediction 302 318 - -
Accr4g00920 376 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00920 Accr-Chr4 8765862 8767752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00920 31 376 HSF AT2G26150 51.576 9.50e-122 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr4g00920 HSF_DNA-bind 3.1e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00920 K09419 - qsu:112015615 488.804