Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00912 ATGTCGACGGTATACGTGTTAGAACCGCCGACGAAAGGGAAGGTGGTGTTGCACACAACCCATGGTCCGCTCGACATTGAGCTATGGCCTAAGGAAGCCCCCAAAGCTGTCAGGAACTTCGTGCAGCTCTGCCTTGAAGGTTACTACTTTAACACCATCTTCCATCGTCTCATCAAGGACTTTCTTATCCAGGGTGGCGATCCCACTGCCAGCGGCACAGGGGGTGAAAGCATTTATGGGGGTGTTTTCTCTGATGAATTTCATTCACGTTTAAGATTTAAACATAGAGGATTAGTTGCAATGGCAAATGCTGGGTCACCAAACTCCAATGGTAGTCAGTTTTTCATAACTCTGGATCGTTGCGACTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACGGGAGATACAGTGTACAATCTTCTGAGATTGGGTGAACTTGAAACTGATAAGAATGATCGACCTCTAGATCCCCCAAAAATATTATCAATTGAGGTGTTATGGAACCCATTTGATGATATTGTTCCAAGAACAAGTCAAGCTCAGATCCAAACTAGTGCCGATACAGACAGTAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTGCTTTCATTTGGAGAAGAAGCTGAAGAAGAGGAAAAGGAGCTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGGAAGCAATTCCTGATAATGAACTGGGCTCATCTGGTGGTAAGTCGACAAGAGATGTGCAATTATCTGTGAGGGATGCATTGAGCTCAAAGAAAGAAGAGTCTCAGAAAAAATCAGAAGATAATGACGCCAACCTTGGTGACAGTGATGATGATGATGAGGCAGACTTTGATGCCAGAATGCGCAGTCAAATACTTAAAAGACGCCAAGAGTTAGGGGATTTACCACTGAAGCCAAAGTTGCGAAATGCAGGAAGCTCAAGTCCAAAGAACCACAATTCATCAGCAATCAGTGTCGATGACGATCAACCTAGGATGGAAAAATTGTCCATGAAGAAAAAGGGAATAGGATCTGAAGCAAGAGCTGAACGAATGGCAAATGCAGATGCAGATTTACAGTTGTTCAATGATTCTGAGAAAAATCGACTGTTGCGGAAGCAGAAGAAACGCAGAGTTCAGGGACGTGAAGATGACGTTCTAGCAAAACTAGAGAAATTTAAGAAGGGTCGATCAGAAAAGAACACACCCTCAACTAATGGATCTGGAGATGCAAATGAAGAGGACGTCTTGGATTGGAGAGGAGCTGGCTTAAAATTTCCGCCCGAGTCTGGCAAGGATCGGATGACACGCAGCGATGACCCTAATGACTATGTTGTGGTTGACCCACTTTTGGAGAAGGGTAAAGAGAAGTTCAATAGGATGCAAGCCAAGCAAAAGAGACGGGAGCGAGAGTGGGCTGGCAAATCCCTTACTTGA 1473 0.4379 MSTVYVLEPPTKGKVVLHTTHGPLDIELWPKEAPKAVRNFVQLCLEGYYFNTIFHRLIKDFLIQGGDPTASGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANAGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTVYNLLRLGELETDKNDRPLDPPKILSIEVLWNPFDDIVPRTSQAQIQTSADTDSKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLKEAIPDNELGSSGGKSTRDVQLSVRDALSSKKEESQKKSEDNDANLGDSDDDDEADFDARMRSQILKRRQELGDLPLKPKLRNAGSSSPKNHNSSAISVDDDQPRMEKLSMKKKGIGSEARAERMANADADLQLFNDSEKNRLLRKQKKRRVQGREDDVLAKLEKFKKGRSEKNTPSTNGSGDANEEDVLDWRGAGLKFPPESGKDRMTRSDDPNDYVVVDPLLEKGKEKFNRMQAKQKRREREWAGKSLT 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00912 490 Coils Coil 205 232 - -
Accr4g00912 490 MobiDBLite consensus disorder prediction 323 339 - -
Accr4g00912 490 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Accr4g00912 490 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Accr4g00912 490 MobiDBLite consensus disorder prediction 461 490 - -
Accr4g00912 490 CDD cyclophilin_CeCYP16-like 8 179 - -
Accr4g00912 490 MobiDBLite consensus disorder prediction 295 315 - -
Accr4g00912 490 MobiDBLite consensus disorder prediction 266 283 - -
Accr4g00912 490 MobiDBLite consensus disorder prediction 389 411 - -
Accr4g00912 490 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Accr4g00912 490 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 18 167 IPR002130 GO:0000413|GO:0003755
Accr4g00912 490 MobiDBLite consensus disorder prediction 266 490 - -
Accr4g00912 490 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Accr4g00912 490 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Accr4g00912 490 Gene3D - 2 182 IPR029000 -
Accr4g00912 490 MobiDBLite consensus disorder prediction 340 365 - -
Accr4g00912 490 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Accr4g00912 490 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Accr4g00912 490 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Accr4g00912 490 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Accr4g00912 490 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00912 Accr-Chr4 8658273 8662752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00912 9 172 U-box Gene Family AT5G67530 48.171 2.73e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00912 K12737 - gmx:100793148 730.709