Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00911 ATGTCGACGGTATACGTGTTAGAACCGCCGACGAAAGGGAAGGTGGTGTTGCACACAACCCATGGTCCGCTCGACATTGAGCTATGGCCTAAGGAAGCCCCCAAAGCTGTCAGGAACTTCGTGCAGCTCTGCCTTGAAGGTTACTACTTTAACACCATCTTCCATCGTCTCATCAAGGACTTTCTTATCCAGGGTGGCGATCCCACTGCCAGCGGCACAGGGGGTGAAAGCATTTATGGGGGTGTTTTCTCTGATGAATTTCATTCACGTTTAAGATTTAAACATAGAGGATTAGTTGCAATGGCAAATGCTGGGTCACCAAACTCCAATGGTAGTCAGTTTTTCATAACTCTGGATCGTTGCGACTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACGGGAGATACAGTGTACAATCTTCTGAGATTGGGTGAACTTGAAACTGATAAGAATGATCGACCTCTAGATCCCCCAAAAATATTATCAATTGAGGTGTTATGGAACCCATTTGATGATATTGTTCCAAGAACAAGTCAAGCTCAGATCCAAACTAGTGCCGATACAGACAGTAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTGCTTTCATTTGGAGAAGAAGCTGAAGAAGAGGAAAAGGAGCTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGGAAGCAATTCCTGATAATGAACTGGGCTCATCTGGTGGTAAGTCGACAAGAGATGTGCAATTATCTGTGAGGGATGCATTGAGCTCAAAGAAAGAAGAGTCTCAGAAAAAATCAGAAGATAATGACGCCAACCTTGGTGACAGTGATGATGATGATGAGGCAGACTTTGATGCCAGAATGCGCAGTCAAATACTTAAAAGACGCCAAGAGTTAGGGGATTTACCACTGAAGCCAAAGTTGCGAAATGGAAGCTCAAGTCCAAAGAACCACAATTCATCAGCAATCAGTGTCGATGACGATCAACCTAGGATGGAAAAATTGTCCATGAAGAAAAAGGGAATAGGATCTGAAGCAAGAGCTGAACGAATGGCAAATGCAGATGCAGATTTACAGTTGTTCAATGATTCTGAGAAAAATCGACTGTTGCGGAAGCAGAAGAAACGCAGAGTTCAGGGACGTGAAGATGACGTTCTAGCAAAACTAGAGAAATTTAAGAAGGGTCGATCAGAAAAGAACACACCCTCAACTAATGGATCTGGAGATGCAAATGAAGAGGACGTCTTGGATTGGAGAGGAGCTGGCTTAAAATTTCCGCCCGAGTCTGGCAAGGATCGGATGACACGCAGCGATGACCCTAATGACTATGTTGTGGTTGACCCACTTTTGGAGAAGGGTAAAGAGAAGTTCAATAGGATGCAAGCCAAGCAAAAGAGACGGGAGCGAGAGTGGGCTGGCAAATCCCTTACTTGA 1470 0.4374 MSTVYVLEPPTKGKVVLHTTHGPLDIELWPKEAPKAVRNFVQLCLEGYYFNTIFHRLIKDFLIQGGDPTASGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANAGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTVYNLLRLGELETDKNDRPLDPPKILSIEVLWNPFDDIVPRTSQAQIQTSADTDSKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLKEAIPDNELGSSGGKSTRDVQLSVRDALSSKKEESQKKSEDNDANLGDSDDDDEADFDARMRSQILKRRQELGDLPLKPKLRNGSSSPKNHNSSAISVDDDQPRMEKLSMKKKGIGSEARAERMANADADLQLFNDSEKNRLLRKQKKRRVQGREDDVLAKLEKFKKGRSEKNTPSTNGSGDANEEDVLDWRGAGLKFPPESGKDRMTRSDDPNDYVVVDPLLEKGKEKFNRMQAKQKRREREWAGKSLT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00911 489 MobiDBLite consensus disorder prediction 460 489 - -
Accr4g00911 489 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Accr4g00911 489 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Accr4g00911 489 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Accr4g00911 489 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Accr4g00911 489 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Accr4g00911 489 MobiDBLite consensus disorder prediction 266 489 - -
Accr4g00911 489 Coils Coil 205 232 - -
Accr4g00911 489 MobiDBLite consensus disorder prediction 388 410 - -
Accr4g00911 489 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Accr4g00911 489 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Accr4g00911 489 CDD cyclophilin_CeCYP16-like 8 179 - -
Accr4g00911 489 MobiDBLite consensus disorder prediction 295 315 - -
Accr4g00911 489 MobiDBLite consensus disorder prediction 266 283 - -
Accr4g00911 489 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Accr4g00911 489 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 18 167 IPR002130 GO:0000413|GO:0003755
Accr4g00911 489 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Accr4g00911 489 MobiDBLite consensus disorder prediction 339 364 - -
Accr4g00911 489 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Accr4g00911 489 MobiDBLite consensus disorder prediction 322 338 - -
Accr4g00911 489 Gene3D - 2 182 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00911 Accr-Chr4 8658273 8662752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00911 9 172 U-box Gene Family AT5G67530 48.171 2.70e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00911 K12737 - gmx:100793148 724.546