Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00898 ATGGATGGCGATAATAGGAATCAAGTTACAAAACCAGCAGAAGCAAGCTTGACGGAGAAGAAAACAACTAATGCAGGCGAGGTGCTGGTGGCGATCTCTGTGCAAGACTCCAAAACGGCTGAATGCAACGACGTCATCAATACTGGGTATGCTGCATCGAAGTCGCCACTTTTAAACGTCGCTTCCCCTGAAATACGTTTCAGTCCCAGCCCAAGGAAGCCACACAAGCACCCTCTCGGCAGCGAAAACCCTCTTCAAAGAAAGTTGCCGATGAGGTCAGTGTATTCCAAACCCAAATCAAGATTTGGTGAACAATCTTATTCTGTTGATGCCGCATTGCTTGAGGGAAACAATGATTTCACATTGCAAGAGCAAATGACTGTTAATTCACCATATAGAAACTCCTTCAATAAGGGTTCGCCGAATAACAAGTCTAGGATTGTCAATAGAACAGCGTCCATAAATTCTTCCATCACCCCCAAGACACCATTCATGGCATCTCCAGGGCCTGCTGGAGAGGATGAGGATGAAATCTTGTCTAGGAGAATTGAAATGAGTAAAGGGAGGCGCAAGACAGTAACCACTAAGGTTTTGATCGAGTGGGTTGTATTTGTATGCATTATGGGGTGCCTAGTGGCTAGCCTGACTGTTAATAAACTGAAGAACACTATCGTTTGGGGCTTGGAGTTTTGGAGATGGTGTGTGCTTGTGTTGGTGATCTTTTGTGGCATGTTAGTGACAAACTGGATAATGCACATAATTGTGTTCTTGATTGAACTAAACTTTTTGCTGAGGAAAAAAGTGCTATATTTTGTTCATGGACTGAAGAAGAGTGTTCAGGTCTTCATTTGGCTGGGTTTGATTCTTCTCACTTGGGTTCTGTTGATCAATCAAAAGGTCCAGCGATCAGAACTCACCACAAAAGTTTTGAATGGGGTAACTCAGACTCTTATTTCTCTTCTCATTGGAGTGTTCTTGTGGTTCCTTAAGACATTGTCTCTAAAGATATTAGCATCAAAATTCCATGTCAGATCCTTCTTTGATAGAATTCAAGAATCGATCTTTCATCAGTATGTTCTGCAGACACTGTCAGGGCCTCCACTTATAGAGGAGGCAGAGAAGATAGGGAGATCACCTAGTATTGGTCAATTTAGTTTTAGACGTACAAAAGGTAAAGGAGGCGTAAAGAAAGAGGTCATTGATGTGGCAAAGCTTCACAAGATGAAACAGGAGAAGGTTTCAGCGGGGACCATGAAGATTTTGGTTGATGCTGTGACAAATTCAAGGTTGTCCACTATCTCTGATGCACTAGATGAAACTTTTGAACAAACTGATAAAGAGATTAGCAATGAGATGGAAGCAACTGCCGCTGCCTATATCATTTTCAGAAATGTTGCAACCCCTGGTTCCTTGTACATTGATGAGGATGACCTTCGGAGGTTTATGATTAAGGAAGAAGTGAATCTGGTGTTTCCCTTGTTTGATGGAGCGGAAACTGGACAAATTGACAGAAAGGCCTTAACAAGCTGGGTGTTGAAGGTTTATCAGGAGCGCAAAGCATTGGCACATGCCTTGGGTGACACCAAAACAGCAGTGAAACAGCTAAGTAAGCTTGTGACAGGGATTCTGGTGGTTGTGACCATAATAGCATGGCTTCTCCTGATGGGGATTGCCACCACAAAATTACTTTTGTTCTTCTCATCACAGCTAGTACTCGTTACTTTCATGTTTGGAAACACATGCAAGAACATATTTGAAGCTATCATCTTTGTGTTTGTGATGCATCCCTTTGATGTCGGTGATCGATGTGTTGTTGATGGTGTTCAGCTACTGGTTGAAGAAATGAATATATTAACCACAGTCTTCTTGAAGCTTAATAATGAAAAGGTGTATTATCCAAACTCAATTCTAGCGACAAAACCCATAAGCAATTATTACAGAAGTCCAGATATGGGAGACAAAGTTGAGTTCTGTGTTGACTTCATGACACCATTGGAGAAACTTGGGGCTCTCAAAGAAAAAGTAAAGAGGTACTTGGAGAGAAATCCACAACATTGGCATCCTAATCACAATGTTGTGCTAAAGGAGATTGAAAATGTGAACAGGTTAAAGATGGCTCTATATGTAACCCACACAATAAACTTTCAAGAGTGGGGAACGAAGAACACGCGAAGAAGTGAACTGTTGACGGAGATAAAGAAAATATTTGAAGAGCTCAATATCAGATACAATCTTCTTCCCCAGGCGGTTCATCTCAGCAATACTGGATCTGATACAACTCTACTCGCAAGATGA 2295 0.4174 MDGDNRNQVTKPAEASLTEKKTTNAGEVLVAISVQDSKTAECNDVINTGYAASKSPLLNVASPEIRFSPSPRKPHKHPLGSENPLQRKLPMRSVYSKPKSRFGEQSYSVDAALLEGNNDFTLQEQMTVNSPYRNSFNKGSPNNKSRIVNRTASINSSITPKTPFMASPGPAGEDEDEILSRRIEMSKGRRKTVTTKVLIEWVVFVCIMGCLVASLTVNKLKNTIVWGLEFWRWCVLVLVIFCGMLVTNWIMHIIVFLIELNFLLRKKVLYFVHGLKKSVQVFIWLGLILLTWVLLINQKVQRSELTTKVLNGVTQTLISLLIGVFLWFLKTLSLKILASKFHVRSFFDRIQESIFHQYVLQTLSGPPLIEEAEKIGRSPSIGQFSFRRTKGKGGVKKEVIDVAKLHKMKQEKVSAGTMKILVDAVTNSRLSTISDALDETFEQTDKEISNEMEATAAAYIIFRNVATPGSLYIDEDDLRRFMIKEEVNLVFPLFDGAETGQIDRKALTSWVLKVYQERKALAHALGDTKTAVKQLSKLVTGILVVVTIIAWLLLMGIATTKLLLFFSSQLVLVTFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLNNEKVYYPNSILATKPISNYYRSPDMGDKVEFCVDFMTPLEKLGALKEKVKRYLERNPQHWHPNHNVVLKEIENVNRLKMALYVTHTINFQEWGTKNTRRSELLTEIKKIFEELNIRYNLLPQAVHLSNTGSDTTLLAR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00898 764 MobiDBLite consensus disorder prediction 9 23 - -
Accr4g00898 764 Coils Coil 762 764 - -
Accr4g00898 764 FunFam Predicted mechanosensitive ion channel 596 645 - -
Accr4g00898 764 SUPERFAMILY Sm-like ribonucleoproteins 585 645 IPR010920 -
Accr4g00898 764 PIRSF Memb_At2g17000 8 761 IPR016688 -
Accr4g00898 764 MobiDBLite consensus disorder prediction 64 90 - -
Accr4g00898 764 Gene3D - 596 645 IPR023408 -
Accr4g00898 764 Pfam Mechanosensitive ion channel 537 742 IPR006685 GO:0016020|GO:0055085
Accr4g00898 764 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 9 755 IPR016688 -
Accr4g00898 764 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00898 Accr-Chr4 8518695 8521393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00898 49 753 Mechanosensitive Ion Channel Family AT5G12080 60.504 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00898 K22048 - qsa:O6P43_019135 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00898 4 8518695 8521393 Accr4g00898 4 8518695 8521393 ECH