Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00886 ATGATTTATAAGAAGCTTACATGGAGATCTATCATCTCAATGTTCAGTTGTTACAAGACTAAATGCCCATTGAAGGAAGCCAAAAAGAAGATCTCAAAGCAAGGTTCTTTTCAGAGACTAAGCCTCTCTGATATCAGCATTTCTAGCTCTGGTCAGGCCATTGATGATCTTTCCATCTCCCTTGTTGGCCAAAAGCTTTATCCATTTACCCTTGAAGAGCTAAGAGAAGCAACACATGATTTCTGTTGGAGTAATATGATCGGTGAAGGTGGGTTTGGACCTGTGTACAAGGGATTTATTGATGACAAGATCAAACCTGGTTTGAAAGCTCAATCTGTGGCTGTGAAAAGACTAAACTTGGATGGTATGCAAGGTCACAGGGAATGGCTGGCAGAGATAATCTTCCTAGGACAGCTAAAACATCCAAATCTTGTTAACTTGCTTGGGTACTGTTATGAGGACGAACACAGGCTTTTAGTGTATGAATACATCCCAAGAGGAAGCTTGGAGTGCCAACTTTTCAGAAGATACACTACAGCCTTGCCATGGTCAACCAGGATAAAAATTGCTTTGGGAGCAGCCAAGGGCCTAGCCTTCCTTCATGAAGCAGACAAACCTGTAATATGTAGAGATTTCAAAACTTCAAATATCTTATTAGACTCGGACTATACAGCTAAATTGTCAGACTTTGGATTTGCAAAAGATGGACCTCAAGGAGAAGACACCCATGTAACAACAAGAATAATAGGAACACAGGGCTATGCAGCACCAGAGTACATAATGACAGGTCACTTAACAACGAAGAGCGATGTGTATAGCTATGGGGTGGTGCTATTACAATTGATAACAGGAAGAAGGATAATGGATAAGAACAGGCCAAGTAGAGAGCAGAGCCTAGTGGAATGGGCAAGGCCTTTATTGAGAGATCAGAGAAAGCTTCATCAGATCATAGACCCTAGACTTGAAGGACGATTTCCTATCAAAGGAGCTCATAAAGTGGCTGCCTTGGCTCACAAGTGCTTGAGCCACCACTCACAGCCTAGGCCCACTATGAGCGATGTGATCAACATTTTGGAGCCACTTCAGCACTTTGATGATGCATTCATTGAACCCTTTGTGTTTGTGGCCGCCAATCAAGATGGCAGAATCAATTAA 1155 0.4234 MIYKKLTWRSIISMFSCYKTKCPLKEAKKKISKQGSFQRLSLSDISISSSGQAIDDLSISLVGQKLYPFTLEELREATHDFCWSNMIGEGGFGPVYKGFIDDKIKPGLKAQSVAVKRLNLDGMQGHREWLAEIIFLGQLKHPNLVNLLGYCYEDEHRLLVYEYIPRGSLECQLFRRYTTALPWSTRIKIALGAAKGLAFLHEADKPVICRDFKTSNILLDSDYTAKLSDFGFAKDGPQGEDTHVTTRIIGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLQLITGRRIMDKNRPSREQSLVEWARPLLRDQRKLHQIIDPRLEGRFPIKGAHKVAALAHKCLSHHSQPRPTMSDVINILEPLQHFDDAFIEPFVFVAANQDGRIN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00886 384 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672|GO:0006468
Accr4g00886 384 Gene3D Transferase(Phosphotransferase) domain 1 164 370 - -
Accr4g00886 384 ProSiteProfiles Protein kinase domain profile. 81 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00886 384 FunFam Serine/threonine-protein kinase BIK1 48 163 - -
Accr4g00886 384 PANTHER OS01G0588500 PROTEIN-RELATED 46 362 - -
Accr4g00886 384 CDD STKc_IRAK 87 361 - -
Accr4g00886 384 SUPERFAMILY Protein kinase-like (PK-like) 58 361 IPR011009 -
Accr4g00886 384 Gene3D Phosphorylase Kinase; domain 1 42 163 - -
Accr4g00886 384 FunFam Serine/threonine-protein kinase PBS1 164 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00886 Accr-Chr4 8417869 8419328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00886 69 358 Glycoside Hydrolase AT3G07070 52.218 7.26e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr4g00886 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00886 - - gmx:100802636 599.742