Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00881 ATGGGGGGTGGTGGTAGAGTTGAAGTTGTAAGTAGCAAGGGATGCTCTGTACTGTTTTCACCTTCATCGCATTTATTCAGGGGTTTGCATCTGCAACCTTTGGAGCCAATGACTCCTGTTTCATCTTTTCACGGTTCTGAACCAGTGGAAGGCCGATCAAATGCTCCTTTTTCTGGTCTTGTTATATGCGTAACCGGTCTATCTAAAGAAGCAAGGAAACAGGTCATGGAGGCGACGGAGAGATTGGGTGGCCAATATAGCCCCCATTTGCATCCTCAATGTACCCATTTGGTGGTTCAGAGCTTTGGCGGGCGCAAATTTGAGCATGCACTGAAGCACGGCACAAGAAATGGTCTTTTTATTGTCACACTGGGTTGGTTTGTCAATAGTGTTAGAAAAAATGTGAGGTTGAGTGAATCACTTTACAGTGTGAAGAATTATGGCAATAACAGTACGAACTTGGATGATTATAAACTGCTCTCCGGGTATACAAATGCTGAAAATTCTTGCCTTCCTTTCAGTTTTCACGAAACCAAGCGAAATGATGGAGCTGAAGAATTGCAAAGATTTTCTGGACGTCAGTTTTGCAAGAATTTGGATTTGCCTTTATCTGGTTGCTCTATATATGTTGATTCAGACATCTCACCTGAATTGCGAACTAAGGTCGTCGAGACTGCTTCCAGAGAAGGTGCCAGTTTGATGGAACAGTGGTTTGTTGGTTGTAATGCAAGTCATGTAGTCACCGAAGGGGCATCAATTCAAAGATTTCTTGGATATTCTAGTAACTTTGTTACACCACTGTGGATTCTAAAAACAGCTCAGGAGAAACAAGTGCAAAGGCTTGTTCACATGTCTGCTGATTTGGTGAGGCAAGTGGGTTTGATGCTCGAGGACATTCATAATGGCACTACAGGGGAGGAATCACTTAAGCACAATCTCCCTGAAGATCTTCAGGGCGTTAAAAGTAAAGGAAGTTACATAGAACGGCAGCAAGTTGTGAACTCTGCAAAAATAGGTGTCAGAAATCGCCGTGGTCGTCGAATGCAGACTTGTCAGACTCCAATGCGTCCTATAACACCTAACAACCTTCTGGATTCTATCTGCTGGTCAATATCTGAACCAACTTCAACAGCTTCCATTTACACCGACTCTCTCAGCGTTGAAGATGCTAGTGAAAATCACTTTTCAACCTTTGGTGATGCAAAGGGGGCCGTCAAAGATTTAGAAACTTCATTTTCTAACTCCACTAGACCTCTAAGAGAAAGTGAGAAGTCTGAACTGATATTTAAAAACCATTTTCTTACCATTCTCTTTCCAATTGATCGATTTGCCGAGATGGGTCCTTCATCAAGAACATTTTTCAGCCACAACGGCTTTACATGCCTTCAGGTGTTGGATCATATATATGCATTTTATCAGGAGAATATGTTGGGGCATGAAATAGAAGCTGCAATTCATACAGATTCAAGACATGCGGATAGGCTTCGATCAGTGTATAGCAGCAAAGAAACAGAAGAACGTGGGTTTGTGATGTTCAAAAGGGTTGAGTTCTTAGGCAGTCGTACGAGTTTTGAAATGTTGAAACGTGTGACAGGGGACAACAACTCTAACGTCTACGAACTATTGCTCAGAGCCTAA 1638 0.4249 MGGGGRVEVVSSKGCSVLFSPSSHLFRGLHLQPLEPMTPVSSFHGSEPVEGRSNAPFSGLVICVTGLSKEARKQVMEATERLGGQYSPHLHPQCTHLVVQSFGGRKFEHALKHGTRNGLFIVTLGWFVNSVRKNVRLSESLYSVKNYGNNSTNLDDYKLLSGYTNAENSCLPFSFHETKRNDGAEELQRFSGRQFCKNLDLPLSGCSIYVDSDISPELRTKVVETASREGASLMEQWFVGCNASHVVTEGASIQRFLGYSSNFVTPLWILKTAQEKQVQRLVHMSADLVRQVGLMLEDIHNGTTGEESLKHNLPEDLQGVKSKGSYIERQQVVNSAKIGVRNRRGRRMQTCQTPMRPITPNNLLDSICWSISEPTSTASIYTDSLSVEDASENHFSTFGDAKGAVKDLETSFSNSTRPLRESEKSELIFKNHFLTILFPIDRFAEMGPSSRTFFSHNGFTCLQVLDHIYAFYQENMLGHEIEAAIHTDSRHADRLRSVYSSKETEERGFVMFKRVEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00881 545 ProSiteProfiles BRCT domain profile. 198 278 IPR001357 -
Accr4g00881 545 SUPERFAMILY BRCT domain 54 145 IPR036420 -
Accr4g00881 545 CDD BRCT_TopBP1_rpt2_like 56 134 - -
Accr4g00881 545 Pfam twin BRCT domain 60 115 IPR001357 -
Accr4g00881 545 Gene3D BRCT domain 55 146 IPR036420 -
Accr4g00881 545 ProSiteProfiles BRCT domain profile. 52 144 IPR001357 -
Accr4g00881 545 Pfam Family of unknown function (DUF6699) 452 529 IPR046522 -
Accr4g00881 545 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 4 545 - -
Accr4g00881 545 SMART BRCT_7 54 134 IPR001357 -
Accr4g00881 545 SMART BRCT_7 200 276 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00881 44 144 Core DNA Replication Machinery Family AT1G77320 39.604 1.58e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00881 - - pcin:129318227 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00881 4 8327243 8333969 Accr4g00881 4 8327243 8333969 ECH