Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00867 ATGGTTTGTGAGATGGAGAATGACTATACCGAGGACATGGACATCGAAATCCTCCATTCGATGTGGCCTGAAGATATTGGAACTGATGTTGGCAAAAAATTTAATATAGAAAAGCCTGGAAAGGACCAAGATATGTTGGAAGAGATTATAATGATGGAATCAACTATAGTTGATTTCAAGCGTCTCATGGAGCTTACAAATTATACAGATAAAGGTTCTTCTCAACTTTCACACCTTATGAAACACTTGGAGTATAAGCAAGCCAATGCATTGCAACTTCTCAGAGAAGAACTTGACAACCTAAGCAAACAGAGGCATGAGGTTGAGCTGAGGAAGTTGCAGATACTGGAGGAGCTTCGGTTCGAGGAAGAAACATATGGGGACAAACGTCCAGTTTCTATTTTGGATGAAATTTATGATTTATGGCAAGATGTACCAAGAAGGAAAAAATGTGATGTTGTTGTTCAGAACAAGAGAATTGAAATAGATGCTGAGTATGATACAAGTGTACATTGGAAACAGAAGGCGCTGGATTTGGAAAAAATGTTGGAGGCAAGTGTCCAAAGAGAGCAGATACTAGCAGAGAAGTTGCAAGAAAGTATAAAGAATCTTGAGAAGCAGTCCTTACCTGTAGAAGAACTGTCCCAGATTCTGAAAAGGGCAGATAATTTCTTGCATTTTGTACTCCAGAATGCACCTGTGGTTATTGGTCATCAGGACAAAGAGTTGCGATATCGATTTATCTATAATCATTTTCCAAGTTTGCACGAGGAGGATATCATTGGAAAAACAGATGTTGAAATTTTTACAGGATCTGGTGTTAAAGAATCTCAAGATTTTAAGAGAGAAGTTCTAGAAAAAGGCTTGCCTGCGAAAAGAGAAATTACTTTCGAGACAGAATTATTTGGTTCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGACAGGGGAGACCCTAGGAATAAACTACATGGGAATGGATGTCACAGATCAGGTGAGAAAAAGAGAAAGGATGATGAAGATCCGGGAAGAAATTGCGGTTCAGAAAGCCAAGGAAACAGAACTGAATAAAACCATCCACATTACGGAGGAGACTATGAGAGCAAAACAAATGTTGGCAACCATGTCTCATGAGATAAGATCCCCATTGTCTGGGGTTGTTAGCATGGCTGACATTCTTTCGAGGACAAAACTTGACCGCGAGCAAAAACAACTCTTGGATGTTATGCTATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTAATGAAGTTAGAAGCAACCAAGTTCCGGCCAAGAGAGGTAGTAAAGCATGTACTCCAGACTGCTGCAGCTTCACTGCAGAAAACATTAACCTTAGAAGGACATGTAGCAGATGATGTACCAACTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAAATCCTCACAAATTTAGTCAGCAACGGTACCAAGTTTACTCATGAAGGCAAGGTTGGTATAAATCTTTATGTTGTGCCAGAGCCATCTTTTGCTAAAGCAGAAGTAAGCCTCCAGAAGACAAGTGCAGACCAGTCTAGCATTTCAGGGAATGGAGTAGAAGAGAAGAAGTATGTCTCAATATCTCAAAATAGCTGTAACCAAAATCAAGCTTTGAGTGATGAAGGTAGATCTCCGGTTAAAAGTGAATGCTTAATGAATGGAGGTACTGAGGAACAACCTCAATCAACTGAAACAACAGTGTGGATACGTTGTGATGTCTATGACACAGGGATTGGAATACCAGAGAAGGCTGTACCTACTTTATTTAAAAGGTACATGCAAGTCAGTGCAGATCATGCAAGAAAGTATGGTGGGACAGGGCTGGGACTAGCAATATGCAAACAACTGGTTGAGTTAATGGGTGGTCGTCTTACTGTGACTAGCAAAGAACAATGTGGTTCTACATTTACCTTCATATTGCCATATAAGGTTTCAACTATTTGTGATCATTCTGATGAGCCCTCAGATACAGAGGATGATGATGATGATGCATCTGATGGTACTGCAGAGGGCTTTTTCCAATTTCAGCCACCCTCTTTGGGCTCTCCATTATCCTCCCATGGATCTAGCTGGGCCCAAAAATTATTACCTCAAGAAATTGGGTGTGCAACCTCGCGTAAATTCAATAGGTTTTCAGAGAATTCCAATTCAATCTCCTCTAATAATGTCAAATCAAAAGAAATAACTTCAGATGAGGTTGCATCCTCAATAACTGATGGCCCGGACTTATCTGAATCTGCATGTTCATCGAGTCACAGCCCAGAGATACAGAATGAAAATGTAGATAGAAGAAACAAATCACGAAATGGCAGTGCAGATTCTTCATATCACAGGGAGTTAGATCAAGATCGGACTGCTATAGCAACAATGTCAAGAGAACAAGCACATCAGAGTCAAGAAAGAGCAGAGATTACCTCGCAATGCGTCACTAGCAGGAGTACTTCAGAAGTAGCAAAACCAGATTTAAAGCCCAAGATCCTTCTCGTGGAGGATAACAAGGTCAATGTCATGGTGACACAGTCAATGATGAAGCAATTAGGCCATAGCATAGATGTTGTGAATAACGGAGTGGAAGCTGTATGTGCCGTTCAGCGCCAGAGCTATGACATAATTCTCATGGATGTGTGCATGCCAGTTATGAATGGTCTACAAGCAACAAGATTGATTCGTTCGTTTGAAGAAACTGGTAACTGGGATGCTGCAAGAGAAGCGGGAATTGAGCTAAATCTACCAGCTTCATCATGTTTATCTGCCACCAAGTCGAACCACATCCCCATTATTGCGATGACAGCAAATGCATTGTCAGAGAGTGCTGAAGAGTGTTATGCAAATGGTATGGACTCATTTGTATCAAAACCTGTGACTTTCCAAAAATTGAAAGATTGTCTTGAGCAGTACTTACGGTGA 2970 0.4057 MVCEMENDYTEDMDIEILHSMWPEDIGTDVGKKFNIEKPGKDQDMLEEIIMMESTIVDFKRLMELTNYTDKGSSQLSHLMKHLEYKQANALQLLREELDNLSKQRHEVELRKLQILEELRFEEETYGDKRPVSILDEIYDLWQDVPRRKKCDVVVQNKRIEIDAEYDTSVHWKQKALDLEKMLEASVQREQILAEKLQESIKNLEKQSLPVEELSQILKRADNFLHFVLQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKTGETLGINYMGMDVTDQVRKRERMMKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMADILSRTKLDREQKQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKTLTLEGHVADDVPTEVIGDVLRIRQILTNLVSNGTKFTHEGKVGINLYVVPEPSFAKAEVSLQKTSADQSSISGNGVEEKKYVSISQNSCNQNQALSDEGRSPVKSECLMNGGTEEQPQSTETTVWIRCDVYDTGIGIPEKAVPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKEQCGSTFTFILPYKVSTICDHSDEPSDTEDDDDDASDGTAEGFFQFQPPSLGSPLSSHGSSWAQKLLPQEIGCATSRKFNRFSENSNSISSNNVKSKEITSDEVASSITDGPDLSESACSSSHSPEIQNENVDRRNKSRNGSADSSYHRELDQDRTAIATMSREQAHQSQERAEITSQCVTSRSTSEVAKPDLKPKILLVEDNKVNVMVTQSMMKQLGHSIDVVNNGVEAVCAVQRQSYDIILMDVCMPVMNGLQATRLIRSFEETGNWDAAREAGIELNLPASSCLSATKSNHIPIIAMTANALSESAEECYANGMDSFVSKPVTFQKLKDCLEQYLR 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00867 989 CDD REC_hyHK_CKI1_RcsC-like 847 984 - -
Accr4g00867 989 SUPERFAMILY CheY-like 845 989 IPR011006 -
Accr4g00867 989 MobiDBLite consensus disorder prediction 778 807 - -
Accr4g00867 989 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 663 IPR003594 -
Accr4g00867 989 Pfam Response regulator receiver domain 847 914 IPR001789 GO:0000160
Accr4g00867 989 MobiDBLite consensus disorder prediction 674 688 - -
Accr4g00867 989 Pfam His Kinase A (phospho-acceptor) domain 372 435 IPR003661 GO:0000155|GO:0007165
Accr4g00867 989 FunFam Histidine kinase 5 212 347 - -
Accr4g00867 989 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 424 664 IPR036890 -
Accr4g00867 989 FunFam Putative histidine kinase 5 358 435 - -
Accr4g00867 989 SMART HisKA_10 370 435 IPR003661 GO:0000155|GO:0007165
Accr4g00867 989 FunFam Histidine kinase 5 839 989 - -
Accr4g00867 989 Gene3D - 841 989 - -
Accr4g00867 989 MobiDBLite consensus disorder prediction 671 709 - -
Accr4g00867 989 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 9 988 - -
Accr4g00867 989 SMART REC_2 845 984 IPR001789 GO:0000160
Accr4g00867 989 Gene3D - 358 435 - -
Accr4g00867 989 ProSiteProfiles Histidine kinase domain profile. 377 665 IPR005467 -
Accr4g00867 989 MobiDBLite consensus disorder prediction 734 837 - -
Accr4g00867 989 PRINTS Bacterial sensor protein C-terminal signature 625 643 IPR004358 GO:0016310|GO:0016772
Accr4g00867 989 PRINTS Bacterial sensor protein C-terminal signature 590 604 IPR004358 GO:0016310|GO:0016772
Accr4g00867 989 PRINTS Bacterial sensor protein C-terminal signature 649 662 IPR004358 GO:0016310|GO:0016772
Accr4g00867 989 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 369 435 IPR036097 GO:0000155|GO:0007165
Accr4g00867 989 CDD HisKA 372 431 IPR003661 GO:0000155|GO:0007165
Accr4g00867 989 Coils Coil 91 118 - -
Accr4g00867 989 Coils Coil 187 207 - -
Accr4g00867 989 CDD HATPase_EvgS-ArcB-TorS-like 486 662 - -
Accr4g00867 989 Gene3D - 436 669 IPR036890 -
Accr4g00867 989 MobiDBLite consensus disorder prediction 808 837 - -
Accr4g00867 989 MobiDBLite consensus disorder prediction 734 777 - -
Accr4g00867 989 ProSiteProfiles Response regulatory domain profile. 846 988 IPR001789 GO:0000160
Accr4g00867 989 Gene3D PAS domain 211 346 - -
Accr4g00867 989 SMART HKATPase_4 481 665 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00867 Accr-Chr4 8204361 8208618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00867 1 988 Histidine Kinase Gene Family AT5G10720 58.492 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr4g00867 HATPase_c 1.7e-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00867 - - gmx:100801640 1373.61