Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00864 ATGGCTTCCAAGCTCTGTGACTCCTGCAAGTCCGCCACCGCCAACCTCTTCTGCCGCGCAGACTCCGCCTTCCTCTGCCTCGGCTGTGACTCCAAGGTCCATGCCGCCAACAAGCTCGCTTCCCGCCACGCGCGTGTATGGGTCTGCGAGGTCTGCGAGCAGGCTCCTGCTCACGTAACCTGCAAGGCTGACGCTGCTGCTCTCTGCATCACCTGCGACCGTGACATCCACTCTGCCAATCCACTCGCTCGTCGTCACGAGCGCGTCCCCGTAACTCCCTTCTATGACCCCGTCCACCCCGTCGGCGTCCCGTCCGGCGCTGCCATCAACTTTTTCAACGACCGTTACTTATCCGACGCCGATGCTGATGCTGATGTCAGCAGGGAAGAGGCGGAAGCGGCTTCCTGGTTGCTTCCTAACCCTTCCAATCCGAAGGCTGTGGAGAGCTCAGATCTGAACTCCGGTGAGTATGTGTTTCCCGAAATGGAGCCTTGCCTAGATCTGGATTTCGGGCCGGTGGATCCGAAGGTGGAAGAAGCTCAGGATCAGAACAGTTCAGGCACCGACGGTGTTGTGCCGGTACAGAGCAAGAGTGCGCAGATTCCATCCCTTAACGACCACTACTATGACATGGAATTGACCCGGTCCAAGAATTTCAACTGCGGTTACAACGGCAGCCAGTGCCTGAGCCAGAGTGTGTCGTCTTCTTCCGTGGATGTCGGGGTTGTTCCAGACGGGAATGCGATATCGAACGGTTACAGCAAGACAGTGATGGGGAGCGAGAATCAGACGGTGCAGATATCAGCGGCCGACAGGGAAGCTAGGGTATTGAGGTACAGGGAGAAGAGGAAGAACCGAAAGTTCCAGAAGACCATTCGGTATGCTTCCAGAAAAGCATATGCTGAAACAAGACCCAGGATCAAAGGCAGATTCGCAAAACGATCGGAGGTAGACCGCTTCGGAGGATACGGCGTGGTACCAAGCTGTTGA 990 0.5667 MASKLCDSCKSATANLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCITCDRDIHSANPLARRHERVPVTPFYDPVHPVGVPSGAAINFFNDRYLSDADADADVSREEAEAASWLLPNPSNPKAVESSDLNSGEYVFPEMEPCLDLDFGPVDPKVEEAQDQNSSGTDGVVPVQSKSAQIPSLNDHYYDMELTRSKNFNCGYNGSQCLSQSVSSSSVDVGVVPDGNAISNGYSKTVMGSENQTVQISAADREARVLRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRSEVDRFGGYGVVPSC 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00864 329 Pfam B-box zinc finger 46 91 IPR000315 GO:0008270
Accr4g00864 329 Pfam B-box zinc finger 4 43 IPR000315 GO:0008270
Accr4g00864 329 Pfam CCT motif 272 314 IPR010402 GO:0005515
Accr4g00864 329 CDD Bbox1_BBX-like 5 48 - -
Accr4g00864 329 SMART bboxneu5 1 48 IPR000315 GO:0008270
Accr4g00864 329 SMART bboxneu5 49 91 IPR000315 GO:0008270
Accr4g00864 329 ProSiteProfiles CCT domain profile. 272 314 IPR010402 GO:0005515
Accr4g00864 329 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Accr4g00864 329 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 317 IPR045281 GO:0009909
Accr4g00864 329 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Accr4g00864 329 CDD Bbox1_BBX-like 48 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00864 Accr-Chr4 8188637 8189701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00864 1 328 C2C2-CO-like Transcription Factor Family AT5G24930 58.791 4.53e-131 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Accr4g00864 zf-B_box 9.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00864 - - pcin:129317838 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00864 4 8188637 8189701 Accr4g00864 4 8188637 8189701 ECH