Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00854 ATGGGTGTTTACCTCAGCACTCCCAAAACTGAAAAGTTTTCCGAAGATGGTGAGAATGACCATCTTAGATATGGTTTATCGTCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCGGCATATCCTGATCTGGATGCGTCCACTTCATTTTTTGGTGTTTATGATGGACATGGAGGGAAGGTGGTTGCAAAGTTTTGTGCTAAGTATCTTCACCAACAGGTGCTTGCAACCGAATCATATCAGGCTGGAGATATAGGAACCTCCCTTCAGAAAGCCTTTTTCAGAATGGATGAGATGATGCGTGGCCAAAGGGGCTGGAGGGAATTAGCAGTCTTGGGGGATAAGATGAATAAATTTACTGGGATGATAGAAGGGTTGATTTGGTCTCCAAGAAACAATGAAAAGAATGATCATGTTGACGATTGGGCTTTTGAGGAGGGCCCACATTCTGATTTTGCTGGACCAACATCAGGAAGCACAGCATGTGTTGCAATTATTAGAAACAATCAGTTAATTGTTGCGAATGCTGGTGATTCACGTTGTGTGATATCTAGAAATGGTCAGGCATACAACTTGTCTAGAGATCACAAACCTGATGTTGAGGCCGAGAAGGAAAGAATTTTAAAAGCTGGTGGTTTCATTCATGCTGGAAGAGTAAATGGCAGTTTGAATCTTGCAAGAGCTATCGGTGACATGGAATTTAAACAGAATAAATTTCTCCCTGCTGAAAAACAAATTGTCACTGCCAATCCTGATATAAACACTGTTGAGCTTTGTGAAGACGACGAATTTGTAGTGCTAGCATGTGACGGCATATGGGATTGCATGTCAAGCCAGCAGTTGGTAGATTTTGTGCTTGAACAACTGCGTTCGGAAAGTAAACTTTCTGTGGTGTGTGAAAGAGTACTTGATCGATGTCTGGCGCCATCAACTGTGGGGGGCGAGGGATGTGATAACATGACAATGATATTGGTGCAGTTCAAGAAACCGACCCACTTCAAAGCAGCAGGAGCAGAGGAGCCATCTTCTGAAGCTGAAGCTAATAATTCAGATGATACGAACCAGAGTGAGTAG 1080 0.4333 MGVYLSTPKTEKFSEDGENDHLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLATESYQAGDIGTSLQKAFFRMDEMMRGQRGWRELAVLGDKMNKFTGMIEGLIWSPRNNEKNDHVDDWAFEEGPHSDFAGPTSGSTACVAIIRNNQLIVANAGDSRCVISRNGQAYNLSRDHKPDVEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVELCEDDEFVVLACDGIWDCMSSQQLVDFVLEQLRSESKLSVVCERVLDRCLAPSTVGGEGCDNMTMILVQFKKPTHFKAAGAEEPSSEAEANNSDDTNQSE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00854 359 PANTHER PROTEIN PHOSPHATASE 2C 20 328 IPR015655 GO:0004722|GO:0006470
Accr4g00854 359 SMART PP2C_4 12 327 IPR001932 -
Accr4g00854 359 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Accr4g00854 359 SMART PP2C_SIG_2 28 329 IPR001932 -
Accr4g00854 359 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Accr4g00854 359 Pfam Protein phosphatase 2C 153 313 IPR001932 -
Accr4g00854 359 MobiDBLite consensus disorder prediction 345 359 - -
Accr4g00854 359 Gene3D - 1 330 IPR036457 -
Accr4g00854 359 MobiDBLite consensus disorder prediction 336 359 - -
Accr4g00854 359 CDD PP2Cc 23 329 IPR001932 -
Accr4g00854 359 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Accr4g00854 359 SUPERFAMILY PP2C-like 3 331 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00854 Accr-Chr4 8080281 8084261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00854 1 332 PP2C-type Phosphatase Gene Family AT2G25070 78.916 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00854 K17499 - csin:114304466 632.869