Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00847 ATGGAATCAACATGCGTGGACACCTCTCTCAACCTCAACGTTGGTCCCCGGGACACACAAGAAACCTCGAGTGAGGATTTGGTGCAAGAGTTGAATCGTTTAAACAGTGAGAATCAGAAGCTAACGGAGAGACTGACACACTTGAGTGAGAGGTTCAATCTTTTGAAAAAGCAATTGATCCAAGTGATGACCAACAACACCGATAATAATACTAGTCCTGAAAGGGATCCAACCAGTGATCAATCATCAAGGAAGAGAAAAGCGGAGACAGAAGCCTGCAAGGATAATATGATTAGTATTAGCGGCAATAATACTGAGAGCATAAGCAACATTACCGACGAAGATTCATCGTTCAGAAGGCAATCCGCTAAGGTTTCCAGAGTTATGGTGCGCATCCAACCATCAGATACTAGCTTGTATTTGAGGGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTGACTCGTGATAACCCTTCTCCAAGAGCTTACTTCAGGTGCTCCTTTGCACCAAGCTGCCCTGTGAAAAAGAAGGTGCAAAGAAGTGCGGAAGACCCGACAGTGTTGGTGGCGACCTACGAAGGAGAGCACAATCATGGTGGACATGGATCTGAATTAGCAACCCTAGCGTCGAACCAGAGCAAAAGTGAATCAGGAGGAATCATATTGGGTGAAAATGGTGGGAAGTCAATGCAGCAGTGTTTGGTTCAACAAATGGCCACTTCTTTGACCAGAGATCCCAACTTTACAGCTGCACTCGCCACCGCCATCTCCGGCAGAATTTTAAACTTTGTTTCTAACTAA 804 0.4527 MESTCVDTSLNLNVGPRDTQETSSEDLVQELNRLNSENQKLTERLTHLSERFNLLKKQLIQVMTNNTDNNTSPERDPTSDQSSRKRKAETEACKDNMISISGNNTESISNITDEDSSFRRQSAKVSRVMVRIQPSDTSLYLRDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPTVLVATYEGEHNHGGHGSELATLASNQSKSESGGIILGENGGKSMQQCLVQQMATSLTRDPNFTAALATAISGRILNFVSN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00847 267 Gene3D WRKY domain 125 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00847 267 SMART WRKY_cls 141 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00847 267 Coils Coil 17 58 - -
Accr4g00847 267 ProSiteProfiles WRKY domain profile. 136 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00847 267 MobiDBLite consensus disorder prediction 78 93 - -
Accr4g00847 267 MobiDBLite consensus disorder prediction 1 23 - -
Accr4g00847 267 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 227 261 IPR044810 GO:0003700
Accr4g00847 267 MobiDBLite consensus disorder prediction 64 94 - -
Accr4g00847 267 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00847 267 SUPERFAMILY WRKY DNA-binding domain 137 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00847 267 FunFam WRKY transcription factor 40 126 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00847 Accr-Chr4 8005724 8007052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00847 3 261 WRKY Transcription Factor Family AT1G80840 44.631 1.34e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr4g00847 WRKY 6.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00847 - - pcin:129318830 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00816 3 9128735 9130102 Accr4g00847 4 8005724 8007052 CCT