Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00844 ATGGCAAAGTGTCACCGGAACAACGTCGCACCCTTGATTCTCGATCGCCACGATCCTACTACGAATGCAGCCGTCGGCGGCCATTTCCGCCTATGGAATGCGCTCTCGGCTTCCTCGTTCCGTCGTATCATTTTTGACGCCGTGAGCTGCGGCAGCAGCTCCCGTTATCACCACTCCCACTGTGATGACCTCAGCTCCACAGCCTCAACCGCAACATCAACCTCTGGGAACTCGAAGGAGAAGCACCGACAACAGAAGCAGGGATCATCCAAGTCTAAGCGTTACTCCAATGCGAGGTCCGAAAAATTATCGGATCTCTTGCATATAGCAAACTCCGAGAATCGCGCCGAAACTAAGAAGAAGGAAAACGCGTTGGAGGAGGTGAAGCAAATTGTGCAGGAGTTGCAAGGAGAGGATTTGGCGAAGCGACAAGTAGCAGCGGCAAATGTTAGATTGCTAGCCAAGGAAAACTTGGAAGTTAGAGGAAATCTCGCAATGCTTGGAGTCATTCCTCCTCTGGTTGCAATGCTCGACTTGGAAGACACCAACTCTCAAATTGCTTCTCTGTATGCGTTGCTCAATCTCGGAATCGGCAACGATGCAAATAAAGCAGCCATTGTCAAAGTTGGCGCTGTTCACAAGATGCTAAAGCTCATTGAGTCTCCTACTGCTCTGGATTCATCAGTCTCTGAAGCGATTGTTGCAAATTTCCTTAGCTTGAGTGCTTTAGATTCAAACAAACCAACCATTGGATCCTCTGGTGCAATACCTGTACTAGTTAGAACCCTTAAAAATGTAGACAATTCATGTAGCCCTCAAGCTAAGCAAGATGCTCTGCGAGCACTGTACAATCTTTCAATCTTCCCAACCAATATCTCATGCATTTTGGAAACCGATTTGATTCCACATCTAATAAACACATTAGGAGACATGGAGGTGAGTGAAAGAGTCCTCCCTATATTGAGCAATCTGGCATCTACACCAGAGGGCCGTAAAGCAATTAGTACTGTGCCAGAAGCATTTCCAATTCTGGTTGATGTATTAAACTGGACAGATGCACCGGGATGCCAAGAGAAAGCTTCCTACATTTTGATGATTATGGCACATAAAGCTTATGGTGACAGGCAGGCCATGATTGAAGCCGGGATCGTATCATCATTGTTTGAATTGACACTTTTGGGTACCCCATTGGCACAAAAAAGAGCCTCTAGGATATTACAATGTCTGAGAGTAGTTAAAGGCAAGCAGGTTTCTGAGAGTTGCAGTGGGAAGTTCCATGCAAATGTCTCTGCTCCTATGTGTGGCTCTTCATCATCGCCTTGTACAAAGCCACGTGGAGGTGGTAGAAGGTCTTTGGAGGGAGATGAAGATATGATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCGACAGAGTTTGCAGAATAACATGAGGAAAATTGTAAAGAGGGCTAACATCCCTCAGGATTTTGTTCCATCTGAACATTTTAAGTCACTTACTTCAAGTTCGACTTCAAAGAGCCTGCCATTTTGA 1539 0.4587 MAKCHRNNVAPLILDRHDPTTNAAVGGHFRLWNALSASSFRRIIFDAVSCGSSSRYHHSHCDDLSSTASTATSTSGNSKEKHRQQKQGSSKSKRYSNARSEKLSDLLHIANSENRAETKKKENALEEVKQIVQELQGEDLAKRQVAAANVRLLAKENLEVRGNLAMLGVIPPLVAMLDLEDTNSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPTALDSSVSEAIVANFLSLSALDSNKPTIGSSGAIPVLVRTLKNVDNSCSPQAKQDALRALYNLSIFPTNISCILETDLIPHLINTLGDMEVSERVLPILSNLASTPEGRKAISTVPEAFPILVDVLNWTDAPGCQEKASYILMIMAHKAYGDRQAMIEAGIVSSLFELTLLGTPLAQKRASRILQCLRVVKGKQVSESCSGKFHANVSAPMCGSSSSPCTKPRGGGRRSLEGDEDMMMSEEKKAVKQLVRQSLQNNMRKIVKRANIPQDFVPSEHFKSLTSSSTSKSLPF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00844 512 Coils Coil 107 138 - -
Accr4g00844 512 Gene3D - 269 423 IPR011989 -
Accr4g00844 512 SMART arm_5 157 197 IPR000225 GO:0005515
Accr4g00844 512 SMART arm_5 288 326 IPR000225 GO:0005515
Accr4g00844 512 SMART arm_5 199 242 IPR000225 GO:0005515
Accr4g00844 512 SMART arm_5 243 287 IPR000225 GO:0005515
Accr4g00844 512 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 512 - -
Accr4g00844 512 MobiDBLite consensus disorder prediction 63 78 - -
Accr4g00844 512 MobiDBLite consensus disorder prediction 436 458 - -
Accr4g00844 512 SUPERFAMILY ARM repeat 127 410 IPR016024 -
Accr4g00844 512 Gene3D - 85 268 IPR011989 -
Accr4g00844 512 MobiDBLite consensus disorder prediction 59 99 - -
Accr4g00844 512 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 254 286 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00844 Accr-Chr4 7924738 7926559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00844 117 410 U-box Gene Family AT2G23140 34.459 2.09e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00844 - - qsa:O6P43_019229 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00807 3 9005171 9007201 Accr4g00844 4 7924738 7926559 CCT