Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00839 ATGACCACAACCAAACATGGCAATTATGTTAGCCCTAGTAGTGCCCCGGTATCAATCTCAAGGGTTGAGCCTGTGTATCCAAAGCATCATTTGAAAGCTTCTGGGAGGGTTTTGAACCTTTCCAATTTAGATAGGCAGTGTCCTACTCTGATGTACGTGGTGTTTTTCTATAACCCATTATCTCAGGAGGCTTTCAAAGATGTGAGCCTCAGTTCAGTTTTTAGCAGCTTGAAGTCAGGGTTGGAAGAAACCCTAAGCGTGTGGTACCCGGCTGCAGGGAGACTGAGGGTGAACCAAAGCGATGGGAAGCTGAACCTGTGGTGCAACAACGAGGGTGCAATCATAGTTGAGGCACAAACCCCTCTTAGATTCTCTCAACTTGGGGACTTGTCTCAGTACAACGAATTCTTTGAGAAGCTGGTTTATAAGCCATCTTTTCATGCTAATTTCTCAAACATGCCTCTGGTTGTTGCTCAGGTGACGAAATTTGGATGCGGAGGGTATTCAATTGGGATTGGGACAAGCCACTCGCTTTTTGACGGACCAGCAACTTATGATTTCTTGAGTGCATGGGCTTCTAATTCTGAATTTCTGAAAGGAATCAAGCATGGTGGTAGTGAGGTGGCAAAACCAGTGCATGAGAGAGGGATATTACTGAGTGGAAGTCTCGAAACCCCAAAAGGGGCTATGCCTATGAATCTGCCTTCTAACTCATCAAGAAGCTCTAATAATCATGATCATCAGCAGACAAAAGCCGTGGCAATAGAACATCTTTATCAGTTGATAATGCAAGCTGCTTCTGAGTACAAAAGCTTTCACCCGCAAAATATTGGATGCTCCGAACAAAACAACTATGTGCTTATGACCTATCACGTAAGCAGTTCGTTCATAGATTACTTAAAGAGGAAACACTTCTCTATGACCACAGATCGCTCCCCTATATTTTCGACCTTCGAGGTTCTTTCATCTCACCTTTGGAAGGCAAGGATCAAAGCACTGGGACTGGGAGAGAGGAGAGAAAAGAAGGTATGCTTGCAGTTCGCAGTGGATACGAGGAACAAGATGGTGCCTCCATTACCAAAAGGTTTCAGCGGGAACGCCTATGTTCTTGCTTCTGTGATGATGTCTGTGAGAGAAGTGGAAGAGGCAAGCTATGAAATGATCGTGGCAAAGATAAGAGAGGCCAAGAACAGAGTGAACCACGCCTATGTGAAAGCCTACGTGGAGGCATTGGAATCTTCATCATCATCATCAGGAAGCCTCCCTCCTTTGAAGGAGCTAACCTTGGTTTCTGATTGGACCAGGATGCCCTTCTATAATGTCGGTTTCTTTCATGGAAAGGCTACCTGTGTTTCTCCTCTCGCTACTCCACTTCCACAGGTTGCTTACTTCATTCCAAGTCCTTCTGACAGTGGAGGTGTTCATGTCAGAATTGGCTTGCACCCCCAATCCACTACTGCTTTTTCCAACTACTTCTTATCCCGAGGCCAATAG 1494 0.4538 MTTTKHGNYVSPSSAPVSISRVEPVYPKHHLKASGRVLNLSNLDRQCPTLMYVVFFYNPLSQEAFKDVSLSSVFSSLKSGLEETLSVWYPAAGRLRVNQSDGKLNLWCNNEGAIIVEAQTPLRFSQLGDLSQYNEFFEKLVYKPSFHANFSNMPLVVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLSAWASNSEFLKGIKHGGSEVAKPVHERGILLSGSLETPKGAMPMNLPSNSSRSSNNHDHQQTKAVAIEHLYQLIMQAASEYKSFHPQNIGCSEQNNYVLMTYHVSSSFIDYLKRKHFSMTTDRSPIFSTFEVLSSHLWKARIKALGLGERREKKVCLQFAVDTRNKMVPPLPKGFSGNAYVLASVMMSVREVEEASYEMIVAKIREAKNRVNHAYVKAYVEALESSSSSSGSLPPLKELTLVSDWTRMPFYNVGFFHGKATCVSPLATPLPQVAYFIPSPSDSGGVHVRIGLHPQSTTAFSNYFLSRGQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00839 497 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 477 - -
Accr4g00839 497 MobiDBLite consensus disorder prediction 231 249 - -
Accr4g00839 497 Pfam Transferase family 16 489 - -
Accr4g00839 497 Gene3D - 14 228 IPR023213 -
Accr4g00839 497 MobiDBLite consensus disorder prediction 222 249 - -
Accr4g00839 497 Gene3D - 265 493 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00839 Accr-Chr4 7854078 7857372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00839 41 493 Monolignol Biosynthesis Gene Families AT5G48930 23.810 2.36e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00839 K15400 - gmx:100779295 600.897