Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00837 ATGAATACTTGTGTCGACAAAATGACGGCGGAGACCGGAATGGATGATCCCGGAGACCAGTTTCCGGTAGGAATGCGTGTTCTTGCCGTTGACGATGACCCAACTTGCCTTTTCTTGTTGGGGGCTCTTCTTCGAAGATGCCAATATAACGTGACGACAACTAATCAGGCAATAGCAGCATTGGAGTTGTTGAGAGAAAACAGAAACAAGTTTGACCTAGTTATCAGTGATGTTCATATGCCAGACATGGATGGATTTAAGCTACTCGAGCATGTAGGACTTGAGATGGACTTGCCAGTCATAATGTTGTCTGCACATGGTGACCCAAAACTAGTGATGAGGGGAATTACCCATGGAGCATGTGATTATCTGCTGAAACCTGTTCGAATGGAAGAGCTAAAGAACATTTGGCAGCATGTGATCAGGAGGAGGAAGTTTGATTCTAAGGAGCAGAACAAACCCAACAACCAAGACAAGCAGCCTCTTGCTGGTAGCGGCTGCAGTCCAGGGTCAGCAGGAACAAGCAACACAGATCAAAAGATGACCAAGAAAAGGAAGGATCAGAATGATGAAGATGATGAGCATGAGGAGGACCCGTCGACCCAGAAGAAGCCTCGGGTTGTCTGGACAGTGGAGCTGCACCGCAAGTTTGTTGCCGCTGTTAATCAGTTAGGCATTGACAAAGCTGTACCTAAAAAGATTCTTGATTTGATGAATGTTGAAAAGCTTACTAGGGAGAATGTGGCTAGCCATCTCCAGAAATATAGGCTTTATTTGAAAAGAATCAGTTGTGTGGCGAACCAACAGGCTAGTCTGGTGGCGGCCTTAGGTACTGCAGATCAATCCTATTGGAGAATGGGTTCTATGAGTGGTCTCAGCAATTTGCATACATTGACTGCTCCTAGACAGTTTCAGAACACTGTTTTTAGACCCCTCTCATCTAGTGGGGTGATTGGTAGATTGAACACTCCTTCTGGCCTGGTTGTGCATGGATCGCCTTCGTCAAGAAATATTCAGTTTGGTTGTGCACAGAATTTAAACAATTCTATGAATGATCCACTCAAGTTCCAGTCAACCATTGTTCATGGTAACCAAAATGGCAATTTAGTTCTGGGAATAACAGGTTATTCTGAGCGTGATCAATTACAACACCATAAGCATAAAAGCATTAGTTCTGTTCAAGACATGGCGAATGCGAGCTGCTCACACACTTCACTTCCAAGTGTAAGAAACAACTCCTTTATGGTAGCAGCGCGTCCTCAAAACACGCAAGGGGGAGGAGCAAATGAGAATTTATCTTCAATAGATTCTCAACCTTCAGAAATTTCTCGCTCTTTGCTGGATCATGGTAGTTGTGGTGCTAATTGGTCAAATGGCGTGCAGCCAACTCAAATCCTGCCAAGTTCTTATCCACCAACTGGGTTTCCTAGACAACTGGGTTTCCTGCCAAGTTCAAATCCGAGTGGTTCTTCATCCATCACTTTAATGTATAGTCAATCCCATGATGCAACAGCAAATGCAAATTCCCAAGGAGGCATTAATTCCTCAGGGCACATGAGCAGTAATGTACAATTTCGAGGGTGGGAAGACCGAAATCAGGATGCTGCTTACCGTTCAAATGTTTTGTGTAGCTCTCTAAACTCTCTGATTCATGAAAATAGTGGTGTTAGTGGATCAGCTAGTCCTTCTCCAACAGACCCAGCCTTCTACAGGAACTTGAACTTCAATTGTGGTAATCCCATACAAACTAAGCATGATGGGTTTGCAAAACTGGCTGAAGAGATCCCGTTGAGACAAGATCAAGGGTATATCATACACCAGCAGATGGCACAACAGAGTCGCATCTCTAACAATCTTGGTTCACTGGATGACTTAGTCGGTTCACTGATGAAACAGGATAAAGACAAGGTGAAATTATTGGATGGAGACTTAATTTGTAATAATTACACTGTAGGGACATCGATGTGA 1968 0.439 MNTCVDKMTAETGMDDPGDQFPVGMRVLAVDDDPTCLFLLGALLRRCQYNVTTTNQAIAALELLRENRNKFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAHGDPKLVMRGITHGACDYLLKPVRMEELKNIWQHVIRRRKFDSKEQNKPNNQDKQPLAGSGCSPGSAGTSNTDQKMTKKRKDQNDEDDEHEEDPSTQKKPRVVWTVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQASLVAALGTADQSYWRMGSMSGLSNLHTLTAPRQFQNTVFRPLSSSGVIGRLNTPSGLVVHGSPSSRNIQFGCAQNLNNSMNDPLKFQSTIVHGNQNGNLVLGITGYSERDQLQHHKHKSISSVQDMANASCSHTSLPSVRNNSFMVAARPQNTQGGGANENLSSIDSQPSEISRSLLDHGSCGANWSNGVQPTQILPSSYPPTGFPRQLGFLPSSNPSGSSSITLMYSQSHDATANANSQGGINSSGHMSSNVQFRGWEDRNQDAAYRSNVLCSSLNSLIHENSGVSGSASPSPTDPAFYRNLNFNCGNPIQTKHDGFAKLAEEIPLRQDQGYIIHQQMAQQSRISNNLGSLDDLVGSLMKQDKDKVKLLDGDLICNNYTVGTSM 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00837 655 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 260 IPR017930 -
Accr4g00837 655 Gene3D - 200 263 - -
Accr4g00837 655 Gene3D - 24 161 - -
Accr4g00837 655 FunFam Two-component response regulator 200 263 - -
Accr4g00837 655 SMART REC_2 25 137 IPR001789 GO:0000160
Accr4g00837 655 SUPERFAMILY CheY-like 24 149 IPR011006 -
Accr4g00837 655 PIRSF RR_ARR_type-B 7 653 IPR017053 GO:0003677|GO:0003700|GO:0009736
Accr4g00837 655 ProSiteProfiles Response regulatory domain profile. 26 141 IPR001789 GO:0000160
Accr4g00837 655 CDD REC_typeB_ARR-like 27 141 - -
Accr4g00837 655 Pfam Response regulator receiver domain 27 135 IPR001789 GO:0000160
Accr4g00837 655 MobiDBLite consensus disorder prediction 155 178 - -
Accr4g00837 655 Pfam Myb-like DNA-binding domain 206 256 IPR001005 -
Accr4g00837 655 SUPERFAMILY Homeodomain-like 201 261 IPR009057 -
Accr4g00837 655 MobiDBLite consensus disorder prediction 147 205 - -
Accr4g00837 655 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 383 IPR045279 GO:0009736
Accr4g00837 655 MobiDBLite consensus disorder prediction 179 205 - -
Accr4g00837 655 NCBIfam myb-like DNA-binding domain, SHAQKYF class 204 257 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00837 Accr-Chr4 7849388 7853112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00837 8 644 Response Regulator Gene Family AT2G25180 44.242 1.20e-131 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Accr4g00837 Response_reg 2.9e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00837 - K14491 gmx:100803879 703.745