Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00835 ATGGAACGAGTTTGTGACAAGGTTCCTCCTAGTCCAAGTACTCCATTGCAGAGCCCAAAGGAGAAGAAACACCTCTCTGTTGAGGAGGAGAAAGAAGAAGAAGAAGAAGAAGAGGAAAAGACTTGTTCTTTGTTAGATCTGAACGTGAATAGAGATGATTCTGCTGTTGGGTGCGACACAGAACTGCATCTCATGGCCAATTTTGATGTAGATATGGAGAAATCTAAAACATCAGAAAATTCTGGTGCTTTAGAGTCAGAGCCACGTGTATTCTCTTGCAAGTACTGTCAGAGGAAGTTTTACAGTTCACAAGCGCTTGGAGGACACCAAAATGCACATAAGAGGGAGAGATTAATAGCGAAAAAAGGACAGAGGGGGATAATGGCCTCTGCTACAGACTTTGGGACTCCTTTTCTGCTTCATAATCACAGATTTACAAGTATGGCGTCTCTACCCCTCCACGGTGCTGCTGGAAATAAACCTCTTGGGATTCAGGCACACTCCATGATTCACAAGTCTTCTCATACTTCTTCTAATTTTGGGTTTGGAAACAGCCTTGGATATAATAGCTGGTCGAGGCCCCTGATTGATCAGAAGCCCAGAATAGGGAAGCTAGAAATGGCTAACTTTCACAGAACCGCAACATTAGGTTTCTCATCACGAGGCAGTGTAGGTAGGTTTGAAACGGTAAAGACGATGGGTGGTTCTGGAGTCAGTGAGGAAATCACTGGGTATTTGGTAAGTGGAACTCTATTGAAGAATGATCAAGAAGAAAAAAAGCACCTTGATTTATCCCTCAAGCTCTAG 807 0.4337 MERVCDKVPPSPSTPLQSPKEKKHLSVEEEKEEEEEEEEKTCSLLDLNVNRDDSAVGCDTELHLMANFDVDMEKSKTSENSGALESEPRVFSCKYCQRKFYSSQALGGHQNAHKRERLIAKKGQRGIMASATDFGTPFLLHNHRFTSMASLPLHGAAGNKPLGIQAHSMIHKSSHTSSNFGFGNSLGYNSWSRPLIDQKPRIGKLEMANFHRTATLGFSSRGSVGRFETVKTMGGSGVSEEITGYLVSGTLLKNDQEEKKHLDLSLKL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00835 268 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Accr4g00835 268 SUPERFAMILY beta-beta-alpha zinc fingers 88 118 IPR036236 -
Accr4g00835 268 Gene3D Classic Zinc Finger 69 134 - -
Accr4g00835 268 FunFam Zinc finger protein 2 69 136 - -
Accr4g00835 268 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 18 268 IPR044246 GO:0009788
Accr4g00835 268 MobiDBLite consensus disorder prediction 1 41 - -
Accr4g00835 268 Coils Coil 20 40 - -
Accr4g00835 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00835 Accr-Chr4 7835820 7836626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00835 11 268 C2H2 Transcription Factor Family AT5G10970 39.051 1.62e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr4g00835 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00835 - - gmx:100783199 265.388