Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00831 ATGGCCAGACCACAACAGAGATATCGAGGCGTCCGACAAAGGCATTGGGGATCATGGGTCTCTGAAATCCGACACCCTCTATTGAAGACGAGGATATGGCTTGGTACATTTGAAACTGCAGAAGATGCAGCCAGAGCTTACGATGAAGCAGCGAGGCTGATGTGTGGTCCAAGAGCAAGAACCAATTTCCCTTACAACGCCAGTGCGTCTCAATCATCATCTTCTAAGCTACTCTCTGCAACCCTCACTGCTAAACTTCATAGATGTTATATGGCTTCGCTTCAAATGACCAGACCCACGGTACCCGAACCTGTACGAGCAACTTCTTCTCCAAATGTTGTGTCCACGAGCACAAGCAACTCTTCCTCTTTGAAAAGCAGAGGAACCAATATTACAATGTTGGGAGAGAAGAAAGCAAAGGAGGAGGCTGAAGAATCAGAGGCAAAGTGGGGTGTGAAGAAGGTGAAGGTGGAAAGTGGTGAGCAATTCAAGCCTCTTGAAGAGGATCATATAGAGCAAATGATTGAGGAGCTTCTTGATTATGGGTCTATTGAGCTCTGCTCTGTCATGCCACCTCAGTAA 582 0.4691 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNASASQSSSSKLLSATLTAKLHRCYMASLQMTRPTVPEPVRATSSPNVVSTSTSNSSSLKSRGTNITMLGEKKAKEEAEESEAKWGVKKVKVESGEQFKPLEEDHIEQMIEELLDYGSIELCSVMPPQ 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00831 193 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Accr4g00831 193 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Accr4g00831 193 Gene3D AP2/ERF domain 6 66 IPR036955 GO:0003700|GO:0006355
Accr4g00831 193 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Accr4g00831 193 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Accr4g00831 193 MobiDBLite consensus disorder prediction 102 128 - -
Accr4g00831 193 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Accr4g00831 193 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Accr4g00831 193 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Accr4g00831 193 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Accr4g00831 193 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00831 Accr-Chr4 7810400 7811085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00831 1 193 AP2-EREBP Transcription Factor Family AT5G25190 66.154 2.08e-81 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr4g00831 AP2 8.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00831 - - gmx:100819158 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00795 3 8808611 8809250 Accr4g00831 4 7810400 7811085 CCT
Accr4g00831 4 7810400 7811085 Accr4g00831 4 7810400 7811085 ECH