Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00829 ATGAAGCTTCTTTTGTTGCTTCCTTTTCTTCAAGGTCCCATTTGGGTTTGTGCCGTGGCCGAAACCCCACTTTCGTCACCCATAGTCCCACCTGTGTCCCCAGCATCAATGGCGCCATTTTCTGCAGATGTTCAGGTGGAGAATGAATGGAAACCAACAGATTTAGACATGAAAGTGGTGATAGCTCTCATCGTAGCCGGAACTGCACTTGGTGCAGTCATTTTGTCTTTCTTATGCTTCTGCATTTGTTACAAGAAATGTCTGTCCAAATTCAACAGGAAAAACGTCCAAAGCTTAGATGTGGAGAAAGAGCTTGCGAGAACCTCATCTTTGAGAAAATTTTGTTCATTCAAGATGGATGATAAGAAGGGATCTATTTCGATATTTGATTATAAGACAATACAAAAGGCGACGAGCAATTTTCTGGAAAGTAATATCTTGGGAGAGGGTGGATTTGGATGCGTTTACAAGGCTCGATTTCATCATAACTTGGATGTTGCCGTCAAGAAATTGAACTGTGAAAGTCAGGACGCTCAGAGGGAGTTTCAGAACGAGGTGGACATGTTAAGTAAAATTCAGCATCCAAATATAATCTCTTTGCTGGGTTGTAGCAGCAATGGTGACACGAGGTTTATTGTCTATGAATTGATGCAAAATGGATCATTGGAGACTCAATTACATGGACCCTCTCATGGATCGGCGTTGACTTGGCACATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAGAGTATCTGCATGAAATCTCTAACCCCCCAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGACGCAAATTTCAATGCCAAGCTGTGTGATTTCGGATTTGCCATAGCTGATGGGTCCCAAGACAAGAATGACATAAAAATCTCAGGCACATTGGGATATGTAGCTCCTGAGTATATATTAGATGGTAAATTAACTGATAAAAGCGATGTGTATGCATTCGGAGTCGTGCTTCTAGAACTTGTGTTTGGGAGGAAGCCAGTGGAAAAGCTAACAGCTACACAGTGCCAGTCTATAGTCACATGGGCGGTGCCACAGCTCAGCGACAGATCCAATCTTCCCAACATTGTGGATCCCATGATCAAGAATACAATGGATCTCAAACATTTATATCAGGTTGCTGCCATGGCGGTGCTGTGCGTGCAACCGGAACCGAGTTACCGTCCGTTGATTACAGATGTTCTGCACTCTCTCATCCCTCTTGTTCCTTCAGAGCTTGGAGGAACACTTAGAGTTCCACAAGCGTCAGAGCCTCCTCCTTCAACATAA 1308 0.4327 MKLLLLLPFLQGPIWVCAVAETPLSSPIVPPVSPASMAPFSADVQVENEWKPTDLDMKVVIALIVAGTALGAVILSFLCFCICYKKCLSKFNRKNVQSLDVEKELARTSSLRKFCSFKMDDKKGSISIFDYKTIQKATSNFLESNILGEGGFGCVYKARFHHNLDVAVKKLNCESQDAQREFQNEVDMLSKIQHPNIISLLGCSSNGDTRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARGLEYLHEISNPPVIHRDLKSSNILLDANFNAKLCDFGFAIADGSQDKNDIKISGTLGYVAPEYILDGKLTDKSDVYAFGVVLLELVFGRKPVEKLTATQCQSIVTWAVPQLSDRSNLPNIVDPMIKNTMDLKHLYQVAAMAVLCVQPEPSYRPLITDVLHSLIPLVPSELGGTLRVPQASEPPPST 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00829 435 PANTHER OS01G0750732 PROTEIN 36 415 - -
Accr4g00829 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Accr4g00829 435 FunFam Protein kinase superfamily protein 108 216 - -
Accr4g00829 435 Gene3D Transferase(Phosphotransferase) domain 1 217 418 - -
Accr4g00829 435 Pfam Protein kinase domain 144 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00829 435 CDD STKc_IRAK 147 414 - -
Accr4g00829 435 SMART serkin_6 141 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00829 435 Gene3D Phosphorylase Kinase; domain 1 100 216 - -
Accr4g00829 435 FunFam probable receptor-like protein kinase At1g80640 217 416 - -
Accr4g00829 435 ProSiteProfiles Protein kinase domain profile. 141 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00829 435 SUPERFAMILY Protein kinase-like (PK-like) 124 411 IPR011009 -
Accr4g00829 435 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00829 Accr-Chr4 7795248 7797937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00829 59 415 Receptor kinase-like Gene Family AT3G58690 42.424 2.76e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Accr4g00829 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00829 - - pcin:129318734 660.218