Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00815 ATGGGGAAGCCCGCCGGGAAGAAGAAGGATCTCTCAGACCATCACAAGGCTGCAAATGGAAACGGCAAGACCAGCAAGCTCTCTGACCGAACCTCCAAACCTATTGTTGATGAAGACACAGCTATGTTCGTCAACATGTCTCATGAGCTCAAGGAAGAAGGTAACAAACTCTCTCAAAAGAAGGATTACCAGGGAGCTATAACCAAGTATGATAAGGCCCTCAAGCTCCTTCCAAAAAACCACATAGAAATTGCTCTCCTCCGAAGCAATATGGCTTTGTGTTATATGCAAATGGGTCTTGGGGAATACCCCAAAGCAATCAATGAATGCAATTTAGCATTAGAAGTATCACCCAGATACAGCAAAGCTCTGTTGAGAAGAGCAAAGTGCTATGAAGAATTGAACCGTTTGGATTTGGCTCTGAGAGATGTTACTTGTGTTTTGAGCTGGGAACCCAATAACCTTCATGCATTGGAGATCATGGAGAGTTTGAAGAAGATAATGGAGGAGAAGGGCATCATTATTGATGAACAAAAGATTGGTTTGGCTATTCCCGCCGGTGGTGGTGCTCGCATGCGTAATGTGGTCAGAGAGAAACTAAAGAAAAAGAAAGGCAAAAAGAGAGAGACAGACAAGGCAGAGGATAAGGTCGTTGTTGCTGAGAAGAATCTGAATGCTACAAAAACTGAAGAAATAGTGACAAAAACAATTGATAAGGAAAAACTGATAGAGGAACCTGTTAAGGAAGAAACAAAGGTAACGAGGACGGCCAAGTTGGTCCATGGAGAGGATATAAGGTGGGCACAGTTACCTGGGAATTGTAGTCTGAAATTGGTAAGGGACATTATTAGAGATCGCTTTCCAGGCTTGAAAGGTGTTCTTGTGAAATATAAAGATCAAGATGGCGATTTGGTCACCATCACTACCACTGAGGAACTAAGGTTAGCTGAATCTTCAGGTCATGTCCTAGGCTCGATTCGACTCCATATCATAGAAGTTGATCCAAGCCAGGAACCACCATCTTATGAAGAAATAGCCACTGAAAAAAAGGTGCCAACAGATGATGATGCTATCAAGCAAAATGGTCCTACGGAAGAAGCCAAAGATCTTGTAACAAAAAGGACGACCACTGTGGAGGACTGGATTGTTCAATTTGCTAGGCTGTTTAAGAACCATGTTGGGTTTGATTCTGATGCATATTTGGATCTTCATGAGATAGGAATGACGCTGTACACAGAAGCAATGGAGGATAGCATAACAAGTGGTGAAGCTCAAGAAATTTTTGATATTTCTATAGATAAATTTCAAGAGATGGCAGCTTTAGCCTTGTTTAACTGGGGGAATGTTCACATGTCCAAGGCAAGGAAGCGACCTACCGTGTCAGAGGACGAGTCAAGTGAATCTTTTTTCAAGAACATTAAGGCTACATACGAGTGGGCACAAAAGCAGTACAGGCTAGCAGAAAAGAGATACGAAGAAGCTGTGAAAATCAAACTAGACTTCTATGAAGGCTATCTTGCTCTTGGTTATCAACAATTTGAACAAGCAAAACTGTGTTGGTTCTATGCGATTGCATGCAAGAAGGAACTAGAATCAGTGCCTTCTGATGAGGTTTTACAACTCTATAACAAGGCAGAGGACAGCATGGAGAAAGGCATGTTGATGTGGGAGGAAATGGAGGAACAGCGATTGAATGGACTGTCCAAATCAGAAAAATATAAAGCTCAATTGGAGAAAATGGGTTTGGATGGCATTTTTAAAGATGTTTCTTTTAATGAAGCTACAGAGCAAGCTGACAATATGAGATCACAGATAAATCTTTTGTGGGGTACTTTATTATATGAACGTTCTGTTGTAGAATATAAGTTAGGCCTACCAACATGGGAGGAATGTTTGGAGATTTCAGTTGAAAAGTTTGAACTTGCTGGAGCTTCTCAAACTGATGTAGCAGTCATGATAAAAAATCATTGTTCCAATGTAACAGCACTCGAAGGTTGGGGGTTCAAAATTGATGAGATAGTACAGGCATGGAATGAGATGTACGATGCTCAGAGGTGGCAATATGGAGTTCCATCGTTTAGACTTGAACCATTGTTTCGTCGGCGAGCCTCGAAACTTCACTACTTGTTGGAGCAATTTTGA 2142 0.415 MGKPAGKKKDLSDHHKAANGNGKTSKLSDRTSKPIVDEDTAMFVNMSHELKEEGNKLSQKKDYQGAITKYDKALKLLPKNHIEIALLRSNMALCYMQMGLGEYPKAINECNLALEVSPRYSKALLRRAKCYEELNRLDLALRDVTCVLSWEPNNLHALEIMESLKKIMEEKGIIIDEQKIGLAIPAGGGARMRNVVREKLKKKKGKKRETDKAEDKVVVAEKNLNATKTEEIVTKTIDKEKLIEEPVKEETKVTRTAKLVHGEDIRWAQLPGNCSLKLVRDIIRDRFPGLKGVLVKYKDQDGDLVTITTTEELRLAESSGHVLGSIRLHIIEVDPSQEPPSYEEIATEKKVPTDDDAIKQNGPTEEAKDLVTKRTTTVEDWIVQFARLFKNHVGFDSDAYLDLHEIGMTLYTEAMEDSITSGEAQEIFDISIDKFQEMAALALFNWGNVHMSKARKRPTVSEDESSESFFKNIKATYEWAQKQYRLAEKRYEEAVKIKLDFYEGYLALGYQQFEQAKLCWFYAIACKKELESVPSDEVLQLYNKAEDSMEKGMLMWEEMEEQRLNGLSKSEKYKAQLEKMGLDGIFKDVSFNEATEQADNMRSQINLLWGTLLYERSVVEYKLGLPTWEECLEISVEKFELAGASQTDVAVMIKNHCSNVTALEGWGFKIDEIVQAWNEMYDAQRWQYGVPSFRLEPLFRRRASKLHYLLEQF 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00815 713 SUPERFAMILY CAD & PB1 domains 254 339 - -
Accr4g00815 713 MobiDBLite consensus disorder prediction 1 20 - -
Accr4g00815 713 Pfam PB1 domain 255 330 IPR000270 GO:0005515
Accr4g00815 713 Gene3D Tetratricopeptide repeat domain 41 180 IPR011990 GO:0005515
Accr4g00815 713 PANTHER PROTEIN CLMP1 1 711 IPR044517 -
Accr4g00815 713 ProSiteProfiles PB1 domain profile. 254 333 IPR000270 GO:0005515
Accr4g00815 713 MobiDBLite consensus disorder prediction 1 34 - -
Accr4g00815 713 SMART tpr_5 47 80 IPR019734 GO:0005515
Accr4g00815 713 SMART tpr_5 468 501 IPR019734 GO:0005515
Accr4g00815 713 SMART tpr_5 85 120 IPR019734 GO:0005515
Accr4g00815 713 SMART tpr_5 121 154 IPR019734 GO:0005515
Accr4g00815 713 Coils Coil 203 230 - -
Accr4g00815 713 SUPERFAMILY TPR-like 47 505 IPR011990 GO:0005515
Accr4g00815 713 Gene3D - 245 332 - -
Accr4g00815 713 ProSiteProfiles TPR repeat profile. 47 80 IPR019734 GO:0005515
Accr4g00815 713 CDD PB1 262 330 - -
Accr4g00815 713 SMART PB1_new 254 333 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00815 Accr-Chr4 7700947 7703188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00815 37 170 Calmodulin-binding Proteins AT3G25230 30.769 3.99e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00815 K26538 - qsa:O6P43_015720 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00785 3 8697520 8699717 Accr4g00815 4 7700947 7703188 CCT