Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00789 ATGTCGCATTTGCTGCACGGGATACTTCATGTAATCATACATGAGATCGACAAACTTCATTCTGGACTCAACCTCAGTGTCAACAACCAGGCTGCAAGAAACATTGGGAAGAAAGTTCTTACCAGAGTCAAGAGTGTTTTGCGATTCAAGCCGCACCAGCAGATAGCTGGGACTAGAATGTATGCAACTGTTGATTTAGATAAAGCAAGAGTTGGGCGAACAAGAACGATACGCCAAGCTTCTAAACCAAAATGGAACGAGACATTTCATATATATTGTGCTCATTCAATTTCTGAGATCATATTCACTGTCAAATATGAAAATCCAATTGGAGCAACTCTAATTGGAAGAGCTCATGTAGCTGCTGAGCTAGTCCTCAAGGGCCACGTAGTGGATACTTGGGTTGCAATCTTAGATGAGGATCGTCGTCCCATACAAGGTGGTTCTAGAATACTTGTCACAATGCAATTCTCTGACGTTACTAAGGATGTAACTTGGTCTCAAGGAATCAAAAGCCCTCGATACGCTGGTGTTCCTCGTACCTTCTTTACTCAAAAAGTTGGCTGCAAAGTTACTTTGTACCAAGATGCTCATGTCCCAAATGCTTATCTTCCTAGGATTCGTTTGTCAGAAGGAAGATATTATGAGCCTAGTAGATGTTGGGAGGACATTTTTAATGCAATCACAAATGCTAGACACTTGATTTACATAACTGGCTGGTCTGTGTATACTGAAATAACCTTGATAAGGGACCCAAGGAGGCCAATTTCTGGTGGAAACATCACTCTTGGGGAACTTTTGAAGAAGAAAGCTGATGAAGGTGTTAATGTTCTTATGCTTGTGTGGGATGATAGAACTTCTGTTGAAGAGCTAAAGAAAGATGGGCTAATGGCGACCCATGATCAAGAAACAGAAGACTATTTCAGGAACACAAAAGTGAAGTGTGTGTTATGTCCACGTAACGCAGATGATGGACGTAGCATAATTCAAGGCATTGAGATTTCAACAATGTTCACTCATCATCAAAAGACAGTGATCGTTGACAGTGAAGTTAACGGCGGCAGGAGCGGAGGAGGATCTCAGAGGCGAAGGATAGTGAGTTTCATCGGCGGTATTGATCTGTGTGATGGGAGATATGACACACAAGAACATCCTTTGTTTTCAACTCTAAACACAACTCATTATAATGATTTTCACCAGCCAAATTTCCCAGGAGCTTCAATTAAAAAAGGAGGCCCAAGAGAGCCATGGCATGATATTCATTGCAAATTAGAAGGGCCAGTGGCTTGGGATGTCTTGTTCAACTTTCAACAAAGGTGGGAGAAACAAGTTGGGAAGCGATTCTTACTTCCTTCTAGATTGCTTGATCAGATTCTAGTGCCTCAATTTAATACAGAGACAGGGAACGACAGAGACGCGTGGACTGTTCAATTGTTCAGATCCATTGATGGTGGTGCAGCTTCTGGTTTTCCTCAAGACCCATCTAAAGCAAATGAATTAGGCCTTGTTAGTGGGAAAGATAACGTTATTGATAGAAGTGTTCAGGATGCTTATATAAATGCTATTAGGCGAGCCAAGAACTTCATCTACATTGAAAACCAGTATTTTCTAGGGAGCTCATATGGTTGGAAGGGATCTGACATTAAAGTTGAAGATATTGGGGCTTTGCATCTTATACCAAAGGAGCTATCTTTGAAGATTGTGAGCAAGATTGAAACGGGAGAAAGGTTTGCTGTGTACATTGTGATCCCAATGTGGCCAGAAGGTGTCCCTGACAGTGGTTCTGTTCAAGCAATATTGGATTGGCAAAGAAGGACAATGGAGATGATGTACACTGATATTGCTGCTGCTATTCAGAGAAAAGGAATCAGAGCCCACCCTAGAGATTACTTGACATTTTTCTGCCTTGGAAATCGAGAGAGTAAGAAACCAGGAGAATACGTTCCTCCAGAGAGACCAGATCCTGACAGCGATTACAGCAAAGCACAAAATGCTAGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCCTTGGTTCTGCCAACATAAACCAGAGATCAATGGATGGTGCAAGGGACACTGAGATTGCAATGGGTGCGTTCCAACCATATTATCTTGCATCCTATGGCCCACCCAGAGGTCAAATATATGGGTTTAGACGAGCTTTATGGTACGAACATCTTGGGGAACCTGAAGGTGATAAAGCCTTTGACCATCCGGAAAGTGAACATTGTGTGAAACTTGTGAATTATCTCTCAGACTTGAATTGGGAAAAATATTCAAATCCAACATTTGACCCACGAAGTTCATTCAACCACCTAATGCGTTATCCTATAGATATAACCAAAGATGGGAATGTAACAAAACTACAAGAGTTTGAATTCTTTCCTGACACTAAGGCTTCTGTTCTTGGCTCCAGATCAAGCCTTCCTCCAATCCTCACCACCTAG 2475 0.4178 MSHLLHGILHVIIHEIDKLHSGLNLSVNNQAARNIGKKVLTRVKSVLRFKPHQQIAGTRMYATVDLDKARVGRTRTIRQASKPKWNETFHIYCAHSISEIIFTVKYENPIGATLIGRAHVAAELVLKGHVVDTWVAILDEDRRPIQGGSRILVTMQFSDVTKDVTWSQGIKSPRYAGVPRTFFTQKVGCKVTLYQDAHVPNAYLPRIRLSEGRYYEPSRCWEDIFNAITNARHLIYITGWSVYTEITLIRDPRRPISGGNITLGELLKKKADEGVNVLMLVWDDRTSVEELKKDGLMATHDQETEDYFRNTKVKCVLCPRNADDGRSIIQGIEISTMFTHHQKTVIVDSEVNGGRSGGGSQRRRIVSFIGGIDLCDGRYDTQEHPLFSTLNTTHYNDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVLFNFQQRWEKQVGKRFLLPSRLLDQILVPQFNTETGNDRDAWTVQLFRSIDGGAASGFPQDPSKANELGLVSGKDNVIDRSVQDAYINAIRRAKNFIYIENQYFLGSSYGWKGSDIKVEDIGALHLIPKELSLKIVSKIETGERFAVYIVIPMWPEGVPDSGSVQAILDWQRRTMEMMYTDIAAAIQRKGIRAHPRDYLTFFCLGNRESKKPGEYVPPERPDPDSDYSKAQNARRFMIYVHAKMMIVDDEYIILGSANINQRSMDGARDTEIAMGAFQPYYLASYGPPRGQIYGFRRALWYEHLGEPEGDKAFDHPESEHCVKLVNYLSDLNWEKYSNPTFDPRSSFNHLMRYPIDITKDGNVTKLQEFEFFPDTKASVLGSRSSLPPILTT 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00789 824 SUPERFAMILY Phospholipase D/nuclease 161 452 - -
Accr4g00789 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 378 IPR001736 GO:0003824
Accr4g00789 824 SMART pld_4 668 695 IPR001736 GO:0003824
Accr4g00789 824 SMART pld_4 336 378 IPR001736 GO:0003824
Accr4g00789 824 Pfam C2 domain 26 136 IPR000008 -
Accr4g00789 824 SUPERFAMILY Phospholipase D/nuclease 514 740 - -
Accr4g00789 824 CDD C2_plant_PLD 4 157 - -
Accr4g00789 824 Pfam Phospholipase D Active site motif 669 695 IPR001736 GO:0003824
Accr4g00789 824 Pfam Phospholipase D Active site motif 336 378 IPR001736 GO:0003824
Accr4g00789 824 PIRSF PLD_plant 1 824 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Accr4g00789 824 FunFam Phospholipase D delta 211 458 - -
Accr4g00789 824 Pfam Phospholipase D C terminal 742 814 IPR024632 -
Accr4g00789 824 FunFam Phospholipase D 481 714 - -
Accr4g00789 824 PANTHER PHOSPHOLIPASE D 4 814 IPR015679 -
Accr4g00789 824 Gene3D C2 domain 3 157 IPR035892 -
Accr4g00789 824 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 159 IPR035892 -
Accr4g00789 824 Gene3D Endonuclease Chain A 486 710 - -
Accr4g00789 824 Gene3D Endonuclease Chain A 209 457 - -
Accr4g00789 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 668 695 IPR001736 GO:0003824
Accr4g00789 824 SMART C2_3c 24 134 IPR000008 -
Accr4g00789 824 ProSiteProfiles C2 domain profile. 1 135 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00789 Accr-Chr4 7504280 7508243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00789 3 824 Phospholipase D Gene Family (Wang group) AT3G15730 63.714 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00789 K01115 - gmx:100791688 1179.85