Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00787 ATGGAGAGTTTGTTATATGGGACGCTTTGCGTAACCATATATGATGTTGATAGGCTGCCCAACAGATGTAACTTAGATTTTTGCAACAAGGATACACCTCATCGAGGGAAGAGATTTCTAGCCCAAGTCAAAGGTTGTTTGCTGTGTCGACCAGAGCTTGTTGGGACAAGACTATATGCAACAGTTGATTTAGACAAAGCCAGAGTTGCTAGAACCAGAATGATCCGACATCAGACCTCCAATCCCAAGTGGAATGAGACATTTCAAATATATTGTGCCCACAAGGTGTCAAACATAGTATTCACAGTCAAAGATGGAAACCCCATTGGAGCAATATTAATTGGAAGAGCTTATGTCCCTGTAGATCAAGTTCTGAGTGGGGGCCCACTAAACAGACAAGTTGAGATTTACGATGAAGACCATCGTCCCATACGAGGTGGCTCTAAAATACATGTCAAAATAGAATTCAACCATGCGGTCAACGATCCATACTGGTCTAGAGGAATAAAGACTGCAGATTTTCCTGGAGTTCCTCATGTTTTCTTCAACCAGAGAGAAAATTGCAAAGTCACTTTGTACCAAGATGCTCATGTCCTTGATGATTTTATTAAGGTATCTATCCCACTGTCCGGGGGAATCAGATATTATAACCCAGGAAGATGTTGGCAGGATATTTTCAGTGCCATTTATAATGCTAAGTACCTGATTTACATAACTGGCTGGTCTGTTTACACTGAAATAACCTTAATTAGGAACTCTGATAAGCCATCCATGACTCTGGGCCAGTTGCTTTTGATGAAAGCTGATGAAGGAGTGAAAGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGATCAACTCAGAAAAGTTGGATTTATGGCAACTCATGATGAAGAAACAGTACAGTACTTTAGGAATACTAAAGTACAATGTGAGTTGTGTCCCAGAAATCCTGATGTTGGAAGGAGCATAATCCAAGGGCTTCAAACTTCAACTATGTTCACTCACCACCAAAAGGCAGTAGTGGTTGACAGTGACTTACCTGAAGTTACTGAAGAGTCCAAGTTAGGATCACAAAAGAGGACTATTGTGAGTTTTATAGGCGGAATTGATCTGTGTGATGGGCGATACGATACGCATGAGCATCCTTTGTTTTCGACGCTGGACACGATCCATAAAGACGATTTTCATCAGCCAAACTTTGCAGGAGCTTCAATTAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATACATTGCAAGCTAGAAGGGCCTATAGCTTGGGATGTCTTGTACAATTTTGAGCAGAGGTGGGAGAAGCAAGTTGGGAAGGACTTGCTTATACCATTAGAAGACTATGATGAGATTCTTGTCTCTCCATCTGAAATATTACCATTAGAAGACAATGAAACATGGACTGTTCAGCTGTTCAGGTCCATTGATGGTGGTGCTGTTTCTGGTTTTCCTAGGGCACAAGAGGAGGCAGCCGAGTGGGGCCTAGTCAGTGGGAAAAACAACATCATAGATAGAAGCATTCAGGATGCTTACATAAACGCTATTAGGCGAGCCAAGAACTTCATCTACATAGAAAACCAGTATTTCCTGGGGAGCTCATATGGCTGGGAAGCAACTGATTTAATAGTTGAAGATATTGGGGCTCTACATCTTATACCAAAGGAGCTATCTTTGAAGATTGTGAGCAAGATTAAAGCAAGAGAGAGGTTTGTTGTGTACATTGTGATCCCAATGTGGCCAGAAGGTGATCCTGAAAGTGCTTCAGTTCAAGCAATATTAGATTGGCAGAGGAGGACAATGGAGATGATGTATACTGATATAGCTGAAGCCCTTGAACAAGTAGGATCTAACGCCGAACCCACAGAATATCTCACTTTTTTCTGTCTTGGAAATAGAGAGGTAGAGAAACCTGGAGAATATATTCCTCCAGAGAGACCAGTTCCTGATACTAACTATGATAGAGCACAAAAAGCCAGGCGCTTCATGATCTATGTTCATTCAAAGATGATGATAGTTGATGATGAGTATATAATAGTTGGTTCAGCCAACATAAACCAGAGATCAATGGATGGAGGAAGAGACACAGAGATAGCAATGGGGGCATTTCAACCGCATCATCTAACAGAGGAAGAGAGCAGACCAAAAGGTCAGATTCATGGATTCAGAAGGGCTTTATGGCTTGAACATCTTCGAGATGTGGATTCTCTAAGGTTGGACTATCCAGAGAGAGAAGAATGTGTGAAGCTTGTGAATTTTGTTGCTGAAGAAGACTGGAAATTATACACAAAGGAAACGTTCGATGAAAATGATTCAAATACTTTTAATCATCTCTTGCGTTACCCCATTGACATAACCAAAAGCGGGAAAGTAATTGCATTGGAAGGGTTTGAGTTCTTTCCTGACACAAAGGCTCGTATTCTGGGTACCAAATCTGAGTTACTTCCTCCTATCCTCACCACCTAG 2478 0.4153 MESLLYGTLCVTIYDVDRLPNRCNLDFCNKDTPHRGKRFLAQVKGCLLCRPELVGTRLYATVDLDKARVARTRMIRHQTSNPKWNETFQIYCAHKVSNIVFTVKDGNPIGAILIGRAYVPVDQVLSGGPLNRQVEIYDEDHRPIRGGSKIHVKIEFNHAVNDPYWSRGIKTADFPGVPHVFFNQRENCKVTLYQDAHVLDDFIKVSIPLSGGIRYYNPGRCWQDIFSAIYNAKYLIYITGWSVYTEITLIRNSDKPSMTLGQLLLMKADEGVKVLMLVWDDRTSDQLRKVGFMATHDEETVQYFRNTKVQCELCPRNPDVGRSIIQGLQTSTMFTHHQKAVVVDSDLPEVTEESKLGSQKRTIVSFIGGIDLCDGRYDTHEHPLFSTLDTIHKDDFHQPNFAGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKDLLIPLEDYDEILVSPSEILPLEDNETWTVQLFRSIDGGAVSGFPRAQEEAAEWGLVSGKNNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWEATDLIVEDIGALHLIPKELSLKIVSKIKARERFVVYIVIPMWPEGDPESASVQAILDWQRRTMEMMYTDIAEALEQVGSNAEPTEYLTFFCLGNREVEKPGEYIPPERPVPDTNYDRAQKARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDTEIAMGAFQPHHLTEEESRPKGQIHGFRRALWLEHLRDVDSLRLDYPEREECVKLVNFVAEEDWKLYTKETFDENDSNTFNHLLRYPIDITKSGKVIALEGFEFFPDTKARILGTKSELLPPILTT 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00787 825 PIRSF PLD_plant 1 825 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Accr4g00787 825 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 666 693 IPR001736 GO:0003824
Accr4g00787 825 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 332 376 IPR001736 GO:0003824
Accr4g00787 825 Pfam C2 domain 7 134 IPR000008 -
Accr4g00787 825 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 157 IPR035892 -
Accr4g00787 825 PANTHER PHOSPHOLIPASE D 4 813 IPR015679 -
Accr4g00787 825 SMART C2_3c 8 133 IPR000008 -
Accr4g00787 825 Gene3D C2 domain 6 165 IPR035892 -
Accr4g00787 825 Gene3D Endonuclease Chain A 486 713 - -
Accr4g00787 825 Pfam Phospholipase D Active site motif 332 376 IPR001736 GO:0003824
Accr4g00787 825 Pfam Phospholipase D Active site motif 667 693 IPR001736 GO:0003824
Accr4g00787 825 FunFam Phospholipase D 479 712 - -
Accr4g00787 825 SUPERFAMILY Phospholipase D/nuclease 509 735 - -
Accr4g00787 825 FunFam Phospholipase D delta 212 456 - -
Accr4g00787 825 Gene3D Endonuclease Chain A 213 453 - -
Accr4g00787 825 Pfam Phospholipase D C terminal 743 815 IPR024632 -
Accr4g00787 825 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Accr4g00787 825 CDD C2_plant_PLD 4 156 - -
Accr4g00787 825 SMART pld_4 332 376 IPR001736 GO:0003824
Accr4g00787 825 SMART pld_4 666 693 IPR001736 GO:0003824
Accr4g00787 825 SUPERFAMILY Phospholipase D/nuclease 166 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00787 Accr-Chr4 7499767 7503093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00787 2 825 Phospholipase D Gene Family (Wang group) AT3G15730 62.830 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00787 K01115 - gmx:100794115 1122.46