Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00786 ATGGTACAATCAAAGAAGTTCAGAGGAGTCAGGCAACGCCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCACCCTCTTCTAAAGAAAAGGGTGTGGCTAGGGACATTTGAGACGGCGGAGGCAGCGGCGAGGGCATATGATCAAGCAGCCATTTTAATGAATGGAAGGAACGCGAAGACGAATTTCCCGGCACCAATAAATGAAGCTGAAGGAGGAGGGTCTTTCTTGTCTCCCAAGGCACTATCAGAGCTGTTATTGACAAAGCTTAAGAAATGCTGCAAGGACCCGTCTCCTTCTTCCCTCACTTGTCTCAGGCTTGATTCTGATAATTCTCACATTGGTGTGTGGCAAAAGAGACCTGGACCTCGCTCTGGTTCCAATTGGGTCATCAGGGTTGAGCTTGGCAAGAAACAAGAAGAAGCACAACAAAATGAAGATAAAACTTCTTCTGCAGACGCCATTAGCAGTAGTGAAGCTGCAAGCGAGGTTGAAGATGAAGAGGCAATGCAGATGATCGATGAGCTTCTTAATTGGAACTATCCTTTTGATTCTTCCCCCACTAGCCCTCAACAAGAACAAATATAA 585 0.4667 MVQSKKFRGVRQRQWGSWVSEIRHPLLKKRVWLGTFETAEAAARAYDQAAILMNGRNAKTNFPAPINEAEGGGSFLSPKALSELLLTKLKKCCKDPSPSSLTCLRLDSDNSHIGVWQKRPGPRSGSNWVIRVELGKKQEEAQQNEDKTSSADAISSSEAASEVEDEEAMQMIDELLNWNYPFDSSPTSPQQEQI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00786 194 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Accr4g00786 194 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 157 - -
Accr4g00786 194 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Accr4g00786 194 MobiDBLite consensus disorder prediction 136 168 - -
Accr4g00786 194 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Accr4g00786 194 CDD AP2 5 64 IPR001471 GO:0003700|GO:0006355
Accr4g00786 194 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Accr4g00786 194 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Accr4g00786 194 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Accr4g00786 194 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Accr4g00786 194 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00786 Accr-Chr4 7493401 7494076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00786 1 185 AP2-EREBP Transcription Factor Family AT5G25390 59.278 8.22e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr4g00786 AP2 1.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00786 - - qsa:O6P43_015692 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00786 4 7493401 7494076 Accr4g00786 4 7493401 7494076 ECH
Accr12g00868 12 8717034 8717962 Accr4g00786 4 7493401 7494076 ECH