Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00758 ATGGACGCAATGTCTAGCTCCGCGATGTTGAGCGAGGCGAGCTCGTGGTCCAGGGCGTTGGTGAAGATCTCTCCCTATACGTTCTCCGCCGTTGGAATCGCCATCTCTATTGGCGTCTCTGTTCTCGGTGCCGCCTGGGGTATTTATATTACTGGAAGTAGCTTGATCGGTGCCGCAATTAAGGAGCCCCGAATCACATCTAAGAATCTTATAAGCGTGATCTTCTGTGAAGCTGTTGCTATTTATGGTGTTATTGTGGCAATCATACTGCAAACCAAATTAGAGAGTGTTCCTCAGGCGAGTATTTATGCACCTGAGTCTCTTAGAGCTGGATATGCAATTTTTGCCTCTGGAATTATTGTGGGCTTTGCAAATCTTGTTTGTGGGTTATGTGTTGGAATAATTGGAAGTAGCTGTGCGTTGTCTGATGCTCAGAACTCCACACTTTTTGTGAAAATTCTTGTGATTGAGATCTTTGGTAGTGCGCTTGGGCTATTTGGAGTTATTGTGGGAATTATCATGTCAGCTCAAGCGTCATGGCCCTCGAAAGTTTAA 555 0.4541 MDAMSSSAMLSEASSWSRALVKISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKEPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPQASIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPSKV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00758 184 CDD ATP-synt_Vo_c_ATP6F_rpt1 28 90 - -
Accr4g00758 184 Gene3D - 26 180 IPR035921 -
Accr4g00758 184 FunFam V-type proton ATPase proteolipid subunit 26 181 - -
Accr4g00758 184 SUPERFAMILY F1F0 ATP synthase subunit C 24 93 IPR035921 -
Accr4g00758 184 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 12 178 - -
Accr4g00758 184 CDD ATP-synt_Vo_c_ATP6F_rpt2 110 174 - -
Accr4g00758 184 Pfam ATP synthase subunit C 32 90 IPR002379 GO:0015078|GO:0033177|GO:1902600
Accr4g00758 184 Pfam ATP synthase subunit C 115 174 IPR002379 GO:0015078|GO:0033177|GO:1902600
Accr4g00758 184 SUPERFAMILY F1F0 ATP synthase subunit C 107 175 IPR035921 -
Accr4g00758 184 PRINTS Vacuolar ATP synthase 16kDa subunit signature 44 68 IPR000245 GO:0033179|GO:0046961|GO:1902600
Accr4g00758 184 PRINTS Vacuolar ATP synthase 16kDa subunit signature 70 94 IPR000245 GO:0033179|GO:0046961|GO:1902600
Accr4g00758 184 PRINTS Vacuolar ATP synthase 16kDa subunit signature 126 152 IPR000245 GO:0033179|GO:0046961|GO:1902600
Accr4g00758 184 PRINTS Vacuolar ATP synthase 16kDa subunit signature 153 176 IPR000245 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00758 Accr-Chr4 7307700 7309736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00758 2 183 Primary Pumps ATPases(2) AT2G25610 87.363 7.76e-108 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00758 K03661 - cit:102611677 314.309