Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00748 ATGGCTCACCATAACAATGGCAACAACAGTTCGAGCCAACAGTTAGTGAAGACCGTCTTCCATGATTTTATGGGCGCGAAGCCCAATGATTCCCTTGTCGTTTTGCCCCCCAAAACCACCACCGTGAGGCTGTCCGAGGCCTCGCCGTCCTCCGCATCGATGTCTGTTGCCGCCTCTTCTGGCGGTGGCCGTGGTCCCTTCTCAACCACTTCCGACATCGGCTCTGAAAGACAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGACCTAGGAGTGATTTTTCTGACACTGGGCTAAGCAACAGACTAATAGGAAACAAAAGAGGCAGTTCTGAGTCCGCTTTCATGGGATCCTCCAGAGACGGCTTCCAGATGGTCCCTGACTCCATTCAAAACTCACATTTGGTTAAGATGTTCCGGAGTACAGCAAGAGGAGATCATCATAGAAGATCTAGTGATGATGAAGTTTTTCCTAGCATGCAGTCACTGAAGCCAACTTCAGCTTCTCAGATATTTCAGCCTTTTACTGGAACTAAGTTTGATGCCAATAGATGGGAACGCTCTGTCGTTATGAATGCTGGACCTTCGATGCAGCATCCACCACGTGCAGCTCAATTAACACCTTTTGTGCACCAGATAGCTTCAAACAAGGTCAGGGAGACCAACATTGGTCCTTCATTTATCTCTCAGTCGGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGCCCTGGAATTTTGAGCTCTATAAACATCACAACTTCTGCCACTGAGAAAACTCCATCTGCAGTGGTGCTTGGTGGAGGCAGGCCAAAGCCTATGATGAATGTAATAGATTTAGAATCATCCACTCCTCTGAGCAAACATGATTCGAGATCTGCCAGCTGCCAGATGACCATATTCTATGGAGGTCAAGCTCACGTGTTTGATAATGTCCACCCTAATAAGGCAGATGTTATAATGAGCTTAGCAGGGTCAAATGGGGGAAGTTGGTCCACAAGCACTTCCTCGCCCAAGCCTCCATTGAAGCAGCTGCTTCATGATTCTGTAGAAACTCAAACTGGGAAGCTTCATGCGACCCCACCATCACCACTAGGGCGACCTCAAGCAAGTGTTGCTGCTAAAGATGGTAGAAGAAACCCAGTTGAAGTAGCCGAGTTAGATACCATTTCTCTAGAGAAGAGAGCCCAATGA 1197 0.477 MAHHNNGNNSSSQQLVKTVFHDFMGAKPNDSLVVLPPKTTTVRLSEASPSSASMSVAASSGGGRGPFSTTSDIGSERQVGNHLEGVPFYGPRSDFSDTGLSNRLIGNKRGSSESAFMGSSRDGFQMVPDSIQNSHLVKMFRSTARGDHHRRSSDDEVFPSMQSLKPTSASQIFQPFTGTKFDANRWERSVVMNAGPSMQHPPRAAQLTPFVHQIASNKVRETNIGPSFISQSAADEGSRTGMKGPGILSSINITTSATEKTPSAVVLGGGRPKPMMNVIDLESSTPLSKHDSRSASCQMTIFYGGQAHVFDNVHPNKADVIMSLAGSNGGSWSTSTSSPKPPLKQLLHDSVETQTGKLHATPPSPLGRPQASVAAKDGRRNPVEVAELDTISLEKRAQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00748 398 Pfam tify domain 295 326 IPR010399 -
Accr4g00748 398 SMART tify_2 292 327 IPR010399 -
Accr4g00748 398 MobiDBLite consensus disorder prediction 43 75 - -
Accr4g00748 398 MobiDBLite consensus disorder prediction 380 398 - -
Accr4g00748 398 MobiDBLite consensus disorder prediction 355 398 - -
Accr4g00748 398 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 138 370 IPR040390 -
Accr4g00748 398 ProSiteProfiles Tify domain profile. 292 327 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00748 Accr-Chr4 7175883 7180071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00748 1 325 Tify Gene Family AT4G32570 38.012 8.43e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr4g00748 tify 1.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00748 - - pcin:129294719 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00701 3 7896843 7902829 Accr4g00748 4 7175883 7180071 CCT