Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00747 ATGGCTCACCATAACAATGGCAACAACAGTTCGAGCCAACAGTTAGTGAAGACCGTCTTCCATGATTTTATGGGCGCGAAGCCCAATGATTCCCTTGTCGTTTTGCCCCCCAAAACCACCACCGTGAGGCTGTCCGAGGCCTCGCCGTCCTCCGCATCGATGTCTGTTGCCGCCTCTTCTGGCGGTGGCCGTGGTCCCTTCTCAACCACTTCCGACATCGGCTCTGAAAGACAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGACCTAGGAGTGATTTTTCTGACACTGGGCTAAGCAACAGACTAATAGGAAACAAAAGAGGCAGTTCTGAGTCCGCTTTCATGGGATCCTCCAGAGACGGCTTCCAGATGGTCCCTGACTCCATTCAAAACTCACATTTGGTTAAGATGTTCCGGAGTACAGCAAGAGGAGATCATCATAGAAGATCTAGTGATGATGAAGTTTTTCCTAGCATGCAGTCACTGAAGCCAACTTCAGCTTCTCAGATATTTCAGCCTTTTACTGGAACTAAGTTTGATGCCAATAGATGGGAACGCTCTGTCGTTATGAATGCTGGACCTTCGATGCAGCATCCACCACGTGCAGCTCAATTAACACCTTTTGTGCACCAGATAGCTTCAAACAAGGTCAGGGAGACCAACATTGGTCCTTCATTTATCTCTCAGTCGGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGCCCTGGAATTTTGAGCTCTATAAACATCACAACTTCTGCCACTGAGAAAACTCCATCTGCAGTGGTGCTTGGTGGAGGCAGGCCAAAGCCTATGATGAATGTAATAGATTTAGAATCATCCACTCCTCTGAGCAAACATGATTCGAGATCTGCCAGCTGCCAGATGACCATATTCTATGGAGGTCAAGCTCACGTGTTTGATAATGTCCACCCTAATAAGGCAGATGTTATAATGAGCTTAGCAGGGTCAAATGGGGGAAGTTGGTCCACAAGCACTTCCTCGCCCAAGCCTCCATTGAAGCAGCTGCTTCATGATTCTGTAGAAACTCAAACTGGGAAGCTTCATGCGACCCCACCATCACCACTAGCAGGGCGACCTCAAGCAAGTGTTGCTGCTAAAGATGGTAGAAGAAACCCAGTTGAAGTAGCCGAGTTAGATACCATTTCTCTAGAGAAGAGAGCCCAATGA 1200 0.4775 MAHHNNGNNSSSQQLVKTVFHDFMGAKPNDSLVVLPPKTTTVRLSEASPSSASMSVAASSGGGRGPFSTTSDIGSERQVGNHLEGVPFYGPRSDFSDTGLSNRLIGNKRGSSESAFMGSSRDGFQMVPDSIQNSHLVKMFRSTARGDHHRRSSDDEVFPSMQSLKPTSASQIFQPFTGTKFDANRWERSVVMNAGPSMQHPPRAAQLTPFVHQIASNKVRETNIGPSFISQSAADEGSRTGMKGPGILSSINITTSATEKTPSAVVLGGGRPKPMMNVIDLESSTPLSKHDSRSASCQMTIFYGGQAHVFDNVHPNKADVIMSLAGSNGGSWSTSTSSPKPPLKQLLHDSVETQTGKLHATPPSPLAGRPQASVAAKDGRRNPVEVAELDTISLEKRAQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00747 399 MobiDBLite consensus disorder prediction 350 399 - -
Accr4g00747 399 Pfam tify domain 295 326 IPR010399 -
Accr4g00747 399 SMART tify_2 292 327 IPR010399 -
Accr4g00747 399 MobiDBLite consensus disorder prediction 43 75 - -
Accr4g00747 399 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 134 371 IPR040390 -
Accr4g00747 399 ProSiteProfiles Tify domain profile. 292 327 IPR010399 -
Accr4g00747 399 MobiDBLite consensus disorder prediction 381 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00747 Accr-Chr4 7175883 7180071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00747 1 325 Tify Gene Family AT4G32570 38.012 8.92e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr4g00747 tify 1.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00747 - - pcin:129294719 601.282