Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00745 ATGAACAAGGAAAATACTGTTTATGCTGAAGGTGAAAATTTTCCTGTCCGAATCACTAGAGCAAGGGCCAGAGCCTTGGGATCATTGGGAGGAATACCTCCTTCCTCCAGGCCACCCTTTAAACAAGCACTGAAGTGTGCCCATCCAACGAAGTCCAAAAGAGCAGCATCTGATGAGAACAAAGCTTCGGTTGTTACTATGGACGGTCTTCAGAAAAAAAGGAGGGCGGTGCTCAGAGATGCAACCAACATCTGCGAAAATTCATGTGATAAAAGTATTGATGCTTCAAGGTTTCAGGCAAAAGGAGGTAAAAACACAGAGTCAGCTTCAGTTGTATCCACAGAAGTTTCATCAACCCAAGAAGATGTTAAAACAAAGTTAGCTGAAGAATTATCCAAAATAAGGGTGGTAGAATCACGTAACATCACTGACGCATTGAAGTTAGAAGACAAAATGCCACCACAACGATGCATGCCCAATGATGCAGGAGGTTGTCTTTCGGCAGACCCCATGCTTTCAACGCAGGACTCTGTGATGTCTGATGAAATCCTGACCGCTCCAGATAAAGAAATAGAGAAACTAAGAGCCTCAGATGGCTTGGGCATTGTAGACATTGATTCAGAGTTAAAGGATTCTCAAGTTTGGAGTTTATATGCCCCAGATATATACAATAACATACGCGTCACAGAGTTTGAAAGAAGACCATCAACTGATTACATGGAGAAGTTGCAGCAGGATATCAATCCAAATATGCGGGGAATTTTGATTGATTGGCTTGTGGAGGTTTCTGATGAATATAAGCTTGTTCCAGATACTCTTTACCTCACTGTAAATCTCATTGACCGGTTTCTCTCTATAAGTTTAACAACGAAACAAAAGCTTCAGCTTGTCGGTGTTGCTTGCATGCTAATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAGTTTTGCTTCATGACAGACAATACATACACGAGAGATGAGGTATTGAAAATGGAGAGTGAGGTTTTAAATCTTCTGCATTTTCAATTATCCGTTCCCACCACCAAAACATTTCTGAGGAGATACATCCAAGTAGCACAATGTTCCTACGAGGTCCCCTGTGTTGAACTCGAATTCCTGGCAAATTATTTGACAGAGCTTACACTTGTTGAATACAGCTTCCTCAAGTTCCTACCTTCCCTTGTTGCTGCATCTGCTATTTTCCTTGCCAGATGGACGCTCAACCAGTCAGAACACCCATGGAACCCAACTCTAGAGCATTACACAAGTTACAAAGCCCCACAACTTAAAGCTAGTGTTCTTGCCCTGGAAGATTTACAGCTGAATACCAACGCATGTCCCCTGAACGCAATACGTGAAAAATATAGACTTCACAAGTTCAAGCGCGTGGCAGCATTATCTGCAAAACCGGTGCGACCTCTTTTCGAGACTTAA 1446 0.4246 MNKENTVYAEGENFPVRITRARARALGSLGGIPPSSRPPFKQALKCAHPTKSKRAASDENKASVVTMDGLQKKRRAVLRDATNICENSCDKSIDASRFQAKGGKNTESASVVSTEVSSTQEDVKTKLAEELSKIRVVESRNITDALKLEDKMPPQRCMPNDAGGCLSADPMLSTQDSVMSDEILTAPDKEIEKLRASDGLGIVDIDSELKDSQVWSLYAPDIYNNIRVTEFERRPSTDYMEKLQQDINPNMRGILIDWLVEVSDEYKLVPDTLYLTVNLIDRFLSISLTTKQKLQLVGVACMLIASKYEEICAPRVEEFCFMTDNTYTRDEVLKMESEVLNLLHFQLSVPTTKTFLRRYIQVAQCSYEVPCVELEFLANYLTELTLVEYSFLKFLPSLVAASAIFLARWTLNQSEHPWNPTLEHYTSYKAPQLKASVLALEDLQLNTNACPLNAIREKYRLHKFKRVAALSAKPVRPLFET 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00745 481 Gene3D - 221 469 - -
Accr4g00745 481 PIRSF Cyclin_A_B_D_E 36 477 IPR046965 GO:0016538|GO:0044772
Accr4g00745 481 SUPERFAMILY Cyclin-like 211 347 IPR036915 -
Accr4g00745 481 FunFam Cyclin A1 337 469 - -
Accr4g00745 481 CDD CYCLIN_AtCycA_like_rpt1 211 346 - -
Accr4g00745 481 SMART Cyclin_C_2 350 473 IPR004367 -
Accr4g00745 481 ProSitePatterns Cyclins signature. 252 283 IPR006671 -
Accr4g00745 481 CDD CYCLIN_AtCycA-like_rpt2 350 464 - -
Accr4g00745 481 PANTHER CYCLINS 181 459 IPR039361 -
Accr4g00745 481 SUPERFAMILY Cyclin-like 349 471 IPR036915 -
Accr4g00745 481 Pfam Cyclin, N-terminal domain 221 348 IPR006671 -
Accr4g00745 481 SMART cyclin_7 354 442 IPR013763 -
Accr4g00745 481 SMART cyclin_7 257 341 IPR013763 -
Accr4g00745 481 FunFam Mitotic cyclin 6 235 335 - -
Accr4g00745 481 Gene3D - 235 348 - -
Accr4g00745 481 Pfam Cyclin, C-terminal domain 350 471 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00745 Accr-Chr4 7154675 7158381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00745 16 479 Core Cell Cycle Gene Families AT5G25380 52.473 4.21e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00745 K06627 - qsa:O6P43_015635 583.563