Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00744 ATGCATAGTACAAAAATGAACAAGGAAAATACTGTTTATGCTGAAGGTGAAAATTTTCCTGTCCGAATCACTAGAGCAAGGGCCAGAGCCTTGGGATCATTGGGAGGAATACCTCCTTCCTCCAGGCCACCCTTTAAACAAGCACTGAAGTGTGCCCATCCAACGAAGTCCAAAAGAGCAGCATCTGATGAGAACAAAGCTTCGGTTGTTACTATGGACGGTCTTCAGAAAAAAAGGAGGGCGGTGCTCAGAGATGCAACCAACATCTGCGAAAATTCATGTGATAAAAGTATTGATGCTTCAAGGTTTCAGGCAAAAGGAGGTAAAAACACAGAGTCAGCTTCAGTTGTATCCACAGAAGTTTCATCAACCCAAGAAGATGTTAAAACAAAGTTAGCTGAAGAATTATCCAAAATAAGGGTGGTAGAATCACGTAACATCACTGACGCATTGAAGTTAGAAGACAAAATGCCACCACAACGATGCATGCCCAATGATGCAGGAGGTTGTCTTTCGGCAGACCCCATGCTTTCAACGCAGGACTCTGTGATGTCTGATGAAATCCTGACCGCTCCAGATAAAGAAATAGAGAAACTAAGAGCCTCAGATGGCTTGGGCATTGTAGACATTGATTCAGAGTTAAAGGATTCTCAAGTTTGGAGTTTATATGCCCCAGATATATACAATAACATACGCGTCACAGAGTTTGAAAGAAGACCATCAACTGATTACATGGAGAAGTTGCAGCAGGATATCAATCCAAATATGCGGGGAATTTTGATTGATTGGCTTGTGGAGGTTTCTGATGAATATAAGCTTGTTCCAGATACTCTTTACCTCACTGTAAATCTCATTGACCGGTTTCTCTCTATAAGTTTAACAACGAAACAAAAGCTTCAGCTTGTCGGTGTTGCTTGCATGCTAATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAGTTTTGCTTCATGACAGACAATACATACACGAGAGATGAGGTATTGAAAATGGAGAGTGAGGTTTTAAATCTTCTGCATTTTCAATTATCCGTTCCCACCACCAAAACATTTCTGAGGAGATACATCCAAGTAGCACAATGTTCCTACGAGGTCCCCTGTGTTGAACTCGAATTCCTGGCAAATTATTTGACAGAGCTTACACTTGTTGAATACAGCTTCCTCAAGTTCCTACCTTCCCTTGTTGCTGCATCTGCTATTTTCCTTGCCAGATGGACGCTCAACCAGTCAGAACACCCATGGAACCCAACTCTAGAGCATTACACAAGTTACAAAGCCCCACAACTTAAAGCTAGTGTTCTTGCCCTGGAAGATTTACAGCTGAATACCAACGCATGTCCCCTGAACGCAATACGTGAAAAATATAGACTTCACAAGTTCAAGCGCGTGGCAGCATTATCTGCAAAACCGGTGCGACCTCTTTTCGAGACTTAA 1461 0.423 MHSTKMNKENTVYAEGENFPVRITRARARALGSLGGIPPSSRPPFKQALKCAHPTKSKRAASDENKASVVTMDGLQKKRRAVLRDATNICENSCDKSIDASRFQAKGGKNTESASVVSTEVSSTQEDVKTKLAEELSKIRVVESRNITDALKLEDKMPPQRCMPNDAGGCLSADPMLSTQDSVMSDEILTAPDKEIEKLRASDGLGIVDIDSELKDSQVWSLYAPDIYNNIRVTEFERRPSTDYMEKLQQDINPNMRGILIDWLVEVSDEYKLVPDTLYLTVNLIDRFLSISLTTKQKLQLVGVACMLIASKYEEICAPRVEEFCFMTDNTYTRDEVLKMESEVLNLLHFQLSVPTTKTFLRRYIQVAQCSYEVPCVELEFLANYLTELTLVEYSFLKFLPSLVAASAIFLARWTLNQSEHPWNPTLEHYTSYKAPQLKASVLALEDLQLNTNACPLNAIREKYRLHKFKRVAALSAKPVRPLFET 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00744 486 Pfam Cyclin, C-terminal domain 355 476 IPR004367 -
Accr4g00744 486 CDD CYCLIN_AtCycA_like_rpt1 216 351 - -
Accr4g00744 486 FunFam Mitotic cyclin 6 240 340 - -
Accr4g00744 486 FunFam Cyclin A1 342 474 - -
Accr4g00744 486 Gene3D - 226 474 - -
Accr4g00744 486 PIRSF Cyclin_A_B_D_E 40 482 IPR046965 GO:0016538|GO:0044772
Accr4g00744 486 SMART Cyclin_C_2 355 478 IPR004367 -
Accr4g00744 486 CDD CYCLIN_AtCycA-like_rpt2 355 469 - -
Accr4g00744 486 PANTHER CYCLINS 186 464 IPR039361 -
Accr4g00744 486 SUPERFAMILY Cyclin-like 354 476 IPR036915 -
Accr4g00744 486 SMART cyclin_7 262 346 IPR013763 -
Accr4g00744 486 SMART cyclin_7 359 447 IPR013763 -
Accr4g00744 486 Pfam Cyclin, N-terminal domain 226 353 IPR006671 -
Accr4g00744 486 ProSitePatterns Cyclins signature. 257 288 IPR006671 -
Accr4g00744 486 SUPERFAMILY Cyclin-like 216 352 IPR036915 -
Accr4g00744 486 Gene3D - 240 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00744 Accr-Chr4 7154675 7158396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00744 21 484 Core Cell Cycle Gene Families AT5G25380 52.473 3.58e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00744 K06627 - qsa:O6P43_015635 583.563