Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00735 ATGTCTATGAAATCGGCGCAATCTTTATTTCGGGATCGGACACAAGAATTTCAGAGTATTGCTGAGAGGCTAAAGAAATCATTAACCTCAGGATCAGGGATAGACGGGCCTAGCAGCAGTTCGAGATCTGATGAACTGCGATCTAATGTTGCAATTCAGTCTGAGTTCAATAGGAGGGCTTCCAAGATTGGTTATGGAATACACCAGACGTCTCAGAAGCTCGCTAAGCTGGCGAAGTTGGCAAAAAGGACTTCGGTTTTTGATGACCCAACTATGGAAATCCAAGAGCTTACCGCAATTATTAAGCAAGATATTACTGCATTGAACTCGGCCGTTGTGGATCTTCAGCTATCGAGCAACTCTAGGAATGAGAGTGGAAATACCTCTAGCGACACAGCTAGTCATTCAACCACAGTTGTGGACGACCTTAAAAATCGATTGATGGGTGCCACGAAAGAGTTTAAAGAAGTCCTAACCTTGCGAACTGAAAACTTGAAAGTACATGAGGACAGAAGACAGTTGTTTTCTTCCACTGCTTCAAAGGATTCTGCCAACCCATTTGTCCGCCAACGTCCATTAGCTTCGAGAATGGCTGCTAGTGCTTCTAATGCCCCTGCGCCCCCATGGGCTAGTGGGCCATCATCTTCAGCGCAGTTGGTTTCTGATCACCGCAAGCAGGAGGATAGGGACCGACAACCCTTGCTACAGAAACAGCAACAGCAGTTAGTTCCATTGCAAGATAGCTACATGCAAAGTAGAGCTGAAGCTCTCCAGAATGTCGAGTCCACTATTCATGAGCTAAGTAACATTTTCAACCAATTGGCAACACTTGTTTCCCAACAAGGAGAGATTGCTGTCAGGATTGACGAGAACATGGATGATACATTGGCAAACGTAGAGGGAGCACAGGGGGCTTTATTAAAGTATCTGAACAGCATATCTTCTAATAGGTGGTTGATGATCAAGATATTTTTTGTACTAATATGTTTCCTTATGGTATTCCTATTTTTTGTGGCATAG 1020 0.4412 MSMKSAQSLFRDRTQEFQSIAERLKKSLTSGSGIDGPSSSSRSDELRSNVAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAIIKQDITALNSAVVDLQLSSNSRNESGNTSSDTASHSTTVVDDLKNRLMGATKEFKEVLTLRTENLKVHEDRRQLFSSTASKDSANPFVRQRPLASRMAASASNAPAPPWASGPSSSAQLVSDHRKQEDRDRQPLLQKQQQQLVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAVRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLICFLMVFLFFVA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00735 339 Gene3D - 51 302 - -
Accr4g00735 339 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 11 26 IPR021538 -
Accr4g00735 339 SMART tSNARE_6 242 309 IPR000727 -
Accr4g00735 339 MobiDBLite consensus disorder prediction 194 240 - -
Accr4g00735 339 PANTHER SYNTAXIN 53 332 IPR045242 -
Accr4g00735 339 CDD SNARE_syntaxin5 250 334 - -
Accr4g00735 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Accr4g00735 339 MobiDBLite consensus disorder prediction 28 47 - -
Accr4g00735 339 SUPERFAMILY t-snare proteins 54 302 IPR010989 GO:0016020|GO:0016192
Accr4g00735 339 Pfam SNARE domain 287 335 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00735 Accr-Chr4 7088775 7091582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00735 1 339 SNARE and Associated Proteins AT3G24350 62.192 2.18e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00735 K08490 - csav:115699031 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00735 4 7088775 7091582 Accr4g00735 4 7088775 7091582 ECH