Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00715 ATGCCAGGTTTGACATGTAATGCTTGCAATAAAGAATTCAGCGATGACGCTGAGCAAAAGCTTCATTACAAATCCGAGTGGCACCGATACAATCTCAAGCGCAAGGTGGCTGGTGTTCCTGGGGTGACGGAAGCACTGTTCATTGCTAAACAATCTGCAGCTGCTCAAGAGAAAGATAAAAATGAAACTCCCATGCTCTACAGTTGTGGCCTTTGTGGAAAAAGTTATAAAAGTTCTAAGGCTCATGCCGAGCACCTGAAATCCCGTGGTCATTTGTTGGGGGCATCTCAAGGAAGTAGTCATTCAGATAACCAGGCAATAGTCAAGCCACTACCACAACGTGTAGTGAATAGACCTCCTCCCAGAAGAGATGTAGACAACGATGAAAGTGAAGGAAGTGAAGATGAATGGGAGGAGGTCGATTCTGAGGATCCTTTGATTAATGAAGCTTCGACATCCTTGACTGGTTTGAATGTGAATGAGCATGATGACCATGTTGATATGGACGAAGATGAGGATGATGATTATGGGGATTTGGATCCATCATGTTGTTTTATGTGTGATCAAAAGCATGATAGTATAGGAAGTTGCATTGTTCACCTGCACAAGCAGCATGGGTTCTTCATTCCAGATGTTGAGTATTTAAAGGATCCCGAAGGCCTGCTTACCTATCTAGGCCTTAAGGTCATGAGGGATTATATGTGCCTTTACTGCAATGATAGATGCCATCCTTTCAGCAGCCTGGAAGCTGTTAGGAAACACATGGCAGCCAAAAGTCACTGTAAAGTGCATTATGGTGATGATGATGAAGAAGAAGAAGTGGAGTTGGAAGAGTTCTATGATTATAGCAGCAGTTATGTGGATGAACAAGGGAAGCAACTTGTTGCATCAGGTGAGTCAGCCAGAAATTTAGAACTTGGCATTGATGGATCGGAGCTTGTAATCACAAAGAAATCAAATGATGGAATATCAACTAAAAAACTTGGTTCTCGTGAATACTTGCGTTATTATCGACAAAAACCCCGCCCATCACCCACAAATAACATGGCTGTTGCTGCCGCATTGGCCTCAAGGTACAGGAGCATGGGTTTGGCAACCGTGCAATCAAGGGAGCATATGGTGAGGCTGAAAGTGCTGAAGGAAATGAATAGGTCTGGTGTGGAAATCATGCGTTCTAAAATAGCCATGAAAAGTAACGTCATCAGGAACTTGCCAAAGAATGTGCCATATTAG 1233 0.4331 MPGLTCNACNKEFSDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFIAKQSAAAQEKDKNETPMLYSCGLCGKSYKSSKAHAEHLKSRGHLLGASQGSSHSDNQAIVKPLPQRVVNRPPPRRDVDNDESEGSEDEWEEVDSEDPLINEASTSLTGLNVNEHDDHVDMDEDEDDDYGDLDPSCCFMCDQKHDSIGSCIVHLHKQHGFFIPDVEYLKDPEGLLTYLGLKVMRDYMCLYCNDRCHPFSSLEAVRKHMAAKSHCKVHYGDDDEEEEVELEEFYDYSSSYVDEQGKQLVASGESARNLELGIDGSELVITKKSNDGISTKKLGSREYLRYYRQKPRPSPTNNMAVAAALASRYRSMGLATVQSREHMVRLKVLKEMNRSGVEIMRSKIAMKSNVIRNLPKNVPY 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00715 410 MobiDBLite consensus disorder prediction 93 173 - -
Accr4g00715 410 MobiDBLite consensus disorder prediction 93 107 - -
Accr4g00715 410 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Accr4g00715 410 SUPERFAMILY beta-beta-alpha zinc fingers 169 243 IPR036236 -
Accr4g00715 410 Gene3D Classic Zinc Finger 4 89 - -
Accr4g00715 410 ProSitePatterns Zinc finger C2H2 type domain signature. 69 91 IPR013087 -
Accr4g00715 410 SMART c2h2final6 4 28 IPR013087 -
Accr4g00715 410 SMART c2h2final6 233 260 IPR013087 -
Accr4g00715 410 SMART c2h2final6 67 91 IPR013087 -
Accr4g00715 410 SMART c2h2final6 182 205 IPR013087 -
Accr4g00715 410 Pfam C2H2 type zinc-finger (2 copies) 184 285 IPR041661 -
Accr4g00715 410 MobiDBLite consensus disorder prediction 129 145 - -
Accr4g00715 410 PANTHER ZINC FINGER PROTEIN 622 2 409 IPR040025 -
Accr4g00715 410 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Accr4g00715 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 91 IPR013087 -
Accr4g00715 410 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00715 1 410 C2H2 Transcription Factor Family AT4G31420 64.096 3.03e-179 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr4g00715 zf-C2H2_2 9.2e-25 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00715 K14816 - zju:107420801 617.461