Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00706 ATGGATAAAGATGGTGATAAAAGAGCTGTTGAGAGGAATGTAGTCTCTAGAAAGGGAATGCCTCGTTTATTCAGAAGAAGTCCTCCTAATACTAAGGATCTAGGTGTTCAGTTGTGCAGCCGACCTAATTGCAGCAGCAAGATTTACTCTTCTATAATTGCTGAGAATGGTTCATGTGTGAAAGGTAAACCTTTGAGGTCTCCAATCCAATCTTCTTTAAGTGGAAAGGAAACAGTTGGAAGATCCTGTAGAACTTTCTCAGGAATTAGTAATCCGAGGAAGTCCCTTAAAGAGCCTCAGCAACGAACACTACCCTCTAGATTAGAGACAGATTCATCTGATGCGAGCAGCATACAGGATGAACCTGAAGTTTCAGTTCGTGTCCCTTCTTCTTCGCCTGCAACTTATCAAAGTCAGCTTCAAGCTGAACAAGCACTAGTGAAAGTGGCAAGCACTTGTGGTTTTTCAAGAACAAGGTCACAGAGAAGTTTTCATCAGTCTGGATTGCGTGGTCAAGAAGCTAAAAGCACTGGTTCAGTGACACGTGCTGGTATCAGTCGATATGTCAAGTGCAACTCAATAAATGATGTCAGCTCCACAGATTGTTCTTCTTCAGATTCAACCATTAATAGAAGGAAGGATATGGTGAAGAGAAGAAATTGTGAAAAGCAAAGTAGTTCCTCTGCCAGAGGGAAGAAATTGAGTGGGTCTTTATTGGAAGGACAGAGTTCTAGTTCTGTAAGTGGCATATCTATTTCTGGTCCAAGAAGATCAAGAAATGTTCATGCTCATGTGGACAACATTGCGTCCGTTAGAACTCAAAGGTCTATGAGTGGTAGAGCTGGGGAAGGGCTTCCAAGACGTAGACCAGGGTCAAGCAACAGACCACCTTCATCTCCTTCAGAATCTGACACCACTCGTCCTCTAATAAATCAGAGTAGAAGACGGTACCAAAACAGTATTGCTGAGGAAATTCATTTACTAGAGACAAATTTCCTTCTTAACGGACTATACTCGTATGATCAGCATAGAGACATGCGTATGGATATTGATAATATGTCATATGAGGAACTATTAGCCCTGGAAGAAAGGATGGGTACTGTGAGCACAGCTTTAACAGAGGAAGCACTGTCAGAATGTCTTAAGAGAAGCATCTTTCAGCCTACACCTTCAAACGAGGAGGAGGACCACGAGATGAACAAAAATACCATTAATGATGTTATCAAATGCAGTATCTGCCAGGATGAATATGTGGTTGGAGATGAATTGGGGGGTCTGAAATGTGAGCATAGATATCATGTAGCTTGCATACAACAGTGGCTTCGCCTCAAGAACTGGTGCCCTATCTGCAAAGCATCAGCAGCACCTTCAAGTTCATCTGTTGCCTCTAATCAGGACTGA 1401 0.424 MDKDGDKRAVERNVVSRKGMPRLFRRSPPNTKDLGVQLCSRPNCSSKIYSSIIAENGSCVKGKPLRSPIQSSLSGKETVGRSCRTFSGISNPRKSLKEPQQRTLPSRLETDSSDASSIQDEPEVSVRVPSSSPATYQSQLQAEQALVKVASTCGFSRTRSQRSFHQSGLRGQEAKSTGSVTRAGISRYVKCNSINDVSSTDCSSSDSTINRRKDMVKRRNCEKQSSSSARGKKLSGSLLEGQSSSSVSGISISGPRRSRNVHAHVDNIASVRTQRSMSGRAGEGLPRRRPGSSNRPPSSPSESDTTRPLINQSRRRYQNSIAEEIHLLETNFLLNGLYSYDQHRDMRMDIDNMSYEELLALEERMGTVSTALTEEALSECLKRSIFQPTPSNEEEDHEMNKNTINDVIKCSICQDEYVVGDELGGLKCEHRYHVACIQQWLRLKNWCPICKASAAPSSSSVASNQD 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00706 466 MobiDBLite consensus disorder prediction 160 180 - -
Accr4g00706 466 MobiDBLite consensus disorder prediction 1 15 - -
Accr4g00706 466 MobiDBLite consensus disorder prediction 63 132 - -
Accr4g00706 466 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 82 455 IPR045191 GO:0061630
Accr4g00706 466 MobiDBLite consensus disorder prediction 198 311 - -
Accr4g00706 466 SMART ring_2 410 450 IPR001841 -
Accr4g00706 466 SUPERFAMILY RING/U-box 409 455 - -
Accr4g00706 466 MobiDBLite consensus disorder prediction 1 33 - -
Accr4g00706 466 MobiDBLite consensus disorder prediction 65 132 - -
Accr4g00706 466 MobiDBLite consensus disorder prediction 227 255 - -
Accr4g00706 466 MobiDBLite consensus disorder prediction 292 311 - -
Accr4g00706 466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 394 464 IPR013083 -
Accr4g00706 466 ProSiteProfiles Zinc finger RING-type profile. 410 451 IPR001841 -
Accr4g00706 466 FunFam E3 ubiquitin-protein ligase arkadia 369 456 - -
Accr4g00706 466 MobiDBLite consensus disorder prediction 207 226 - -
Accr4g00706 466 Pfam Ring finger domain 409 451 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00706 Accr-Chr4 6782547 6784837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00706 312 454 C3H Transcription Factor Family AT2G15530 43.056 1.21e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00706 - - gmx:100787213 372.089