LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr4g00692	ATGAAGAATTATAAGGATCAACCAGAGAAGCATGAGAAAAAGAGTGCGAATGGAATAGTGGCTGTGGGAATAGACAAAGACCACAAGGGCAGTCAAAATGCACTCAAATGGGCAACTGAACATCTCCTTGCGAGAGGCTCAACCCTAGTTCTCATCCATGTCGTTGTTAAGGGAACGTCTCAAGGTTCATGGTCACTGGCAAATAGTATTGTGGACAAGGGTTCATCGCCACACAAAGACGCTGATGGTCGCACCGACGAAATTTTTCACCCATGTCATGTCTTTTGTGCACGGAAAGGCATACAATGCAAGGATGTCATACTAGAAGATTCAGATGTAGCGAGAGCTTTGATTGAATATGCTTTTCTCACAGCTGTAGAGCATTTAGTTCTTGGCGCTTCAAATAAAACTGGCTTCTTGAGAAGATTCAAGCTAGCTGATATTCCAGGAATGGTGGCAAAAGGGGCACCAGATTTCTGTTCTGTCTACGTTGTTGCTAAAGAAAAGATTCAAACAATGCGATCAGCTTCTCGTCCTGCTCCAGCCTTGTCCCCTTCCAGCAAGCATATTCAAGCAAACACCAAGTCAAAACTATTAGAGACAAATATGCCTTTAAATAATCATGCACATGAAAAACGATCAACTGGTGCACAAAGTACAATAAAGGATGAAAGTGAATCCTTCAGGTCACCATTAACCAGGAGAAATTTGAACGGCAATTCACATAGGGAAAATACCTTTCCAGGGATGTCCACCCATGGGGTATCATTTAGCTCAGAGGTAGATGGGAAAGATAGCTTTGGGTCATTGCAGTATCAAAAGGGGTCTATGGATATTAGCTCTCCTCCGGAATCCTTCTCATCAGATAGTGATGGACTTTTAACATCACATGCCACGGATGATGGTATAGAGGCTGAAATAAGGAGACTAAAGTTGGAGCTTAAGAGAACAATGGAAATGTATAGCGCTGCCTGTAAAGAAGCGTTCATAGCCCAGCAGAAGACAATGGAACTCCAACAATGGAAAAGGGGGGAAGAGAGGAGATTGGAAGAAGCAAGGCTTGCTGAGGAAGCAGCATTTACCGTTGCAGAAAAGGAGATGGCCAGAAGAAAAGCAGCCAAGGAGGCTGTAGAAGCACGAAAGAGGATTGCAGAACTAAAAACAAAAAAGAGAGTTGCTGCAGAAGTGAAAGCACTGAAAGAATCAGAAGAGAATATAGAAGCACTTGGTGCTTTAACAAACACAGGCATCAGTTATAGAAAGTATTCAATTGAGGAGATTGAAGCTGCGACAGAGTACTTTTCAAATTCATTAAAGATTGGAGAAGGGGGTTATGGCCCGGTATATAAGTGCCATCTAGACGGTACACTTGTGGCAGTGAAGGCTCTACGTCCTGATGCAGCACAAGGGAGGTCACAGTTTCAACGAGAGGTTGAGGTACTGAGCGGCATAAGGCATCCAAACATGGTTCTCCTCCTGGGAGCATGTCCAGAATATGGCTGCCTTGTCTATGAGTACATGGCCAACGGAAGCTTAGAAGATCGCTTGTTTTGTCGCGGAAACACTCCCCCTCTTCCTTGGCGGCTCAGGTTCAAAATTGCAGCCGGAATAGTCACTGGCTGCTTGTTTCTACACCAGAGAAAACCAGAGCCTCTGGTGCACAGGGACTTGAAACCAGCTAACATCCTGCTTGACAGCAACTACAACGCCAAGATCAGTGATGTAGGCTTAGCCAGGCTAATTCCACCATCTTTGATTGACAATGTCACACAATATCAGATGACATCCGCTGCTGGAACTTTCTGCTATATAGATCCAGAGTACCAACAGACAGGATTGGTTGGGGTGAAATCTGATGTATACTCCCTTGGGATTATTTTTCTGCAGATTTTAACAGCTCGGCCACCCATGGGTTTGACCCATCAGGTTGAGAGAGCCATTGAGAAAGGAACATTTGCTCAGATACTGGATCCAACAATTCCTGATTGGCCCGTAGAGGAGGCCTTGAGCCTGGCAACTTTAGCACTTAAGTGTTCCCAGTTAAGGCGAAAAGATCGAACTGACCTCGCCAAGGTTGTCTTTCCTGAATTGAACAGATTGAAAAATCTCGCTTAA	2115	0.4459	MKNYKDQPEKHEKKSANGIVAVGIDKDHKGSQNALKWATEHLLARGSTLVLIHVVVKGTSQGSWSLANSIVDKGSSPHKDADGRTDEIFHPCHVFCARKGIQCKDVILEDSDVARALIEYAFLTAVEHLVLGASNKTGFLRRFKLADIPGMVAKGAPDFCSVYVVAKEKIQTMRSASRPAPALSPSSKHIQANTKSKLLETNMPLNNHAHEKRSTGAQSTIKDESESFRSPLTRRNLNGNSHRENTFPGMSTHGVSFSSEVDGKDSFGSLQYQKGSMDISSPPESFSSDSDGLLTSHATDDGIEAEIRRLKLELKRTMEMYSAACKEAFIAQQKTMELQQWKRGEERRLEEARLAEEAAFTVAEKEMARRKAAKEAVEARKRIAELKTKKRVAAEVKALKESEENIEALGALTNTGISYRKYSIEEIEAATEYFSNSLKIGEGGYGPVYKCHLDGTLVAVKALRPDAAQGRSQFQREVEVLSGIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLFCRGNTPPLPWRLRFKIAAGIVTGCLFLHQRKPEPLVHRDLKPANILLDSNYNAKISDVGLARLIPPSLIDNVTQYQMTSAAGTFCYIDPEYQQTGLVGVKSDVYSLGIIFLQILTARPPMGLTHQVERAIEKGTFAQILDPTIPDWPVEEALSLATLALKCSQLRRKDRTDLAKVVFPELNRLKNLA	704

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr4g00692	704	PANTHER	OS02G0152300 PROTEIN	20	703	-	-
	Accr4g00692	704	Gene3D	HUPs	3	165	IPR014729	-
	Accr4g00692	704	SUPERFAMILY	Protein kinase-like (PK-like)	415	693	IPR011009	-
	Accr4g00692	704	Coils	Coil	362	389	-	-
	Accr4g00692	704	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	408	506	-	-
	Accr4g00692	704	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	552	564	IPR008271	GO:0004672\|GO:0006468
	Accr4g00692	704	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	22	160	-	-
	Accr4g00692	704	ProSiteProfiles	Protein kinase domain profile.	434	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr4g00692	704	Pfam	Universal stress protein family	20	157	IPR006016	-
	Accr4g00692	704	Pfam	Protein kinase domain	437	687	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr4g00692	704	Gene3D	Transferase(Phosphotransferase) domain 1	507	703	-	-
	Accr4g00692	704	CDD	STKc_IRAK	440	700	-	-
	Accr4g00692	704	CDD	STK_N	19	167	-	-
	Accr4g00692	704	MobiDBLite	consensus disorder prediction	206	297	-	-
	Accr4g00692	704	FunFam	Os07g0541700 protein	507	600	-	-
	Accr4g00692	704	MobiDBLite	consensus disorder prediction	206	295	-	-
	Accr4g00692	704	Gene3D	Phosphorylase Kinase; domain 1	403	506	-	-
	Accr4g00692	704	SMART	serkin_6	434	694	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr4g00692	Accr-Chr4	6680511	6684024	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr4g00692	12	704	Receptor kinase-like Gene Family	AT1G78940	51.648	0.0	682

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Accr4g00692		Pkinase	4.7e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr4g00692	-		-	pcin:129294308	1029.62