Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00680 ATGATGGAGGCGAAGCCGGCCGCCGTCTTGCCTGCGTACACCGCCGCTCAGTCTCAATCCCAATCCCGATCCCCGCATGCGTCGTCGGTTCTCACCGGCGTATGCAACATGAAACGGACGCCGTCGGAGTTGGCCCTGGAAGAGTTCCTCAACAAGGCGGTGTCGTCGACCAACGACGAGGACGTGAAACCGTGCGAGCTTTGGGGTCAAAGAGACAAAAGTTTCGCCGACGCGGACGCATTTCTCGCCGGCAACGATTTCGATCACGCTTTCCGAAACTCGGATGCAGTGACTACTTTTTCAAGTTGCAAGGGACTAGCAGATTCACTATTATGGTCTCCGAATGAGACTCCCAAGGACTCACCTCTCTGTGCTACAATTGAATCTCAGTCATCCATTTGTGGTACTGCTGTTTGCAGCCCTGTGTCAGCTAATCAAGCAACAACACTTGGAGATAATCAAGCGAAAGGAACCACAAGTGCTTCGTCTCTTGAACAATCTGATGAGGATGACGTAGCTGGTCCTTGTGATCCTAGCACAAACCCCATTGATATGAAGCGCCTCAGAAGGAAGGTTTCTAATCGGGAATCTGCCAGGAGATCCAGAAGAAGAAAACAAGCGCATCTGGCTGATCTTGAGTTACAGGGTGAGCAACTGAGATTGGAGAATGCAGCTCTCTACAAGCAGCTTACAGATGCCAGCCAGCAATTCCGCGAGGCTAACACAAATAACCGAGTTCTGAAATCAGAAGTCGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAAGATATGCTGACTAGGGGCTCCTTCTCCACCTTAAACAATCCTCTTGTTCAGAATCAGAGTCAGCTAAACGCAGCACCACAACGACGACACGGCATGGCACACGTCTCGCCCACCATCGCCGTCCATGGAAGTGATGCCTCATATGCTGTTGCAGTTGATGACCACAATTCATCTCTTGGTCTTGGAAACTTAAATATCAGCAACAACAATTTCAACTCTGGAGTTGTTATTAATGATGCTATGAGCTGCATCAATGATATTTATCGCTGA 1056 0.4953 MMEAKPAAVLPAYTAAQSQSQSRSPHASSVLTGVCNMKRTPSELALEEFLNKAVSSTNDEDVKPCELWGQRDKSFADADAFLAGNDFDHAFRNSDAVTTFSSCKGLADSLLWSPNETPKDSPLCATIESQSSICGTAVCSPVSANQATTLGDNQAKGTTSASSLEQSDEDDVAGPCDPSTNPIDMKRLRRKVSNRESARRSRRRKQAHLADLELQGEQLRLENAALYKQLTDASQQFREANTNNRVLKSEVEALRAKVKLAEDMLTRGSFSTLNNPLVQNQSQLNAAPQRRHGMAHVSPTIAVHGSDASYAVAVDDHNSSLGLGNLNISNNNFNSGVVINDAMSCINDIYR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00680 351 MobiDBLite consensus disorder prediction 148 167 - -
Accr4g00680 351 MobiDBLite consensus disorder prediction 148 183 - -
Accr4g00680 351 FunFam BZIP transcription factor 184 235 - -
Accr4g00680 351 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Accr4g00680 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 247 IPR004827 GO:0003700|GO:0006355
Accr4g00680 351 PANTHER BASIC LEUCINE ZIPPER 63 21 333 - -
Accr4g00680 351 SMART brlzneu 182 246 IPR004827 GO:0003700|GO:0006355
Accr4g00680 351 Pfam bZIP transcription factor 185 235 IPR004827 GO:0003700|GO:0006355
Accr4g00680 351 Gene3D - 185 241 - -
Accr4g00680 351 SUPERFAMILY Leucine zipper domain 186 236 IPR046347 GO:0003700|GO:0006355
Accr4g00680 351 Coils Coil 195 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00680 Accr-Chr4 6587662 6590860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00680 37 350 bZIP Transcription Factor Family AT5G24800 40.938 9.32e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr4g00680 bZIP_1 1.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00680 K25784 - qsa:O6P43_015554 312.383