Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00676 ATGCAAAAGGAGAAGGAATCAAGCTGTAGGGAGATGGAGATGTGTGGAGGGAAAGAGGAAACCCTACCACCAGGATTTAGATTCCATCCTTCAGATGAAGAGCTTATCACTTACTATCTCATGAACAAGATCTCTGATTCTAGCTTCACTGGAAGAGCTATTGCTGATGTTGATCTCAACAAAAGCGAGCCTTGGGACCTCCCTGGGAAGGCAAAGATGGGAGAGAAAGAATGGTACTTCTTCAGCCTGAGAGATCGCAAGTACCCAACTGGAGTGAGAACGAATCGAGCAACCAACACAGGTTACTGGAAAACCACCGGCAAAGACAGGGAAATCATCAACACCGCCACGTCGGAGCTCCTTGGCTTGAAGAAGACTTTGGTTTTCTACAAAGGCAGAGCCCCTAGAGGCGAGAAAACCAACTGGGTCATGCACGAATACCGCATCCACTCTAAATCCAACAAGCAAGATGAATGGGTGGTATGCCGAGTGTTTCAGAAGAGTGGGACAAGTATGGTAAAGAAATTTCCTTCCAACCATACAAGAGGATCTCTGAATCCTTATGGCCTGGACATTGCAAGTTTTACAGGTGGTACCACTATTAACATTCCACAACACATGAATCTGATGCATCAGCTTGGAGATCCAGCAGCTCATTTCCTTTACGGAAGGAATATTAATAATAATAATGGTTACATGATGAATTATTCTGTGCCAAGCAATAGTACTACTTCTCTGAATCTACCAATGCAACAATATAATTTCAACTATCCAGTTACAGCATCAGGAGGGTTCAGTATCTCAGGACTAAATTTGAATCTGGGAAATGCGTCATCAGTTGCAGTAGGTGATGGAGCAACATCTACGTTGTCATCACAACCCTTTTTGCGATCACTCAGTGACCAACACGATTTGGTGAGTTCTAACAACGTTGTCACACCTGTCACTTCTCTCGTTGCAGACAACCTAGGAGGCTATGGTGTGGATATCAGCAACGTCGTCAATCCTCAGACTCAGATCAGTAGTAATAGGTATATGGGCATGCCGGATCACTGTGTGGACCTCGATGCTTACTGGCCTTCCTACTGA 1089 0.4472 MQKEKESSCREMEMCGGKEETLPPGFRFHPSDEELITYYLMNKISDSSFTGRAIADVDLNKSEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDREIINTATSELLGLKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSNKQDEWVVCRVFQKSGTSMVKKFPSNHTRGSLNPYGLDIASFTGGTTINIPQHMNLMHQLGDPAAHFLYGRNINNNNGYMMNYSVPSNSTTSLNLPMQQYNFNYPVTASGGFSISGLNLNLGNASSVAVGDGATSTLSSQPFLRSLSDQHDLVSSNNVVTPVTSLVADNLGGYGVDISNVVNPQTQISSNRYMGMPDHCVDLDAYWPSY 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00676 362 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Accr4g00676 362 Gene3D NAC domain 31 171 IPR036093 GO:0003677|GO:0006355
Accr4g00676 362 ProSiteProfiles NAC domain profile. 22 167 IPR003441 GO:0003677|GO:0006355
Accr4g00676 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 237 - -
Accr4g00676 362 FunFam NAC domain-containing protein 100-like 31 171 - -
Accr4g00676 362 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00676 Accr-Chr4 6486766 6488678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00676 18 362 NAC Transcription Factor Family AT2G24430 49.162 3.65e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr4g00676 NAM 2.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00676 - - gmx:100804931 408.683