Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00640 ATGGAGCAGAGTGAAACCATTTCTGATCTAGCACCACGGAAATTTGTTCGGCAATTGGATTTCACGGCCATCGGCGGAGATTCAGTGAACGTAGAATTGCCGAGGGCACATGAATCTCTGCCACATTTAGAACTACCACCGCAGACGCAGAAACCACTGCCACAATCGATTTTGCGGTCACAATCACTATCGCCGTCTCAAATACAAATTGAACCGAAGTTGCAGTCGCAAGCATACACACCGACACAATCAAAGTTACCTCTACGGTCGCCGGGGCAGCAGCTATGGTCATCTTCACACACACAACAACAGCGACCACCGCAATCTCAGGTCAACCAGCAATCGCAACCGCGGCCGCAGCTAGTTTCACCTGTTCGTCGAATTCCGCACCCTGTGCAGAAAATTTCGATGGCGACGTTACCATTACTGAAGCAAGAGTCTCCCAGTAAACGACCTTGGCATAATGTGGGATCAGAAGACAGCACTCCAAAGAAACAAAAGCAGTGCAACTGCAAGAATTCTCGATGCCTCAAATTGTACTGTGAGTGTTTTGCAGCTGGTATACACTGTGATGGATGCAACTGTTTAAATTGTCATAATAATGTGGATAATGAGGCCGCCAGAGAAGAGGCAGTTGGAATAATTTTAGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCAAGCAGTCCACAAGAACCACAGGGTTCCAAGGAAGAGGCTGAAATTCAAGTATTGGGGAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGTTGTCTTAAGAAGTATTGTGAGTGTTTCCAAGCCAATGTCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGAAGAAAGAATTGCTCTTGATCCAATGAACCTCAAACAGGCAGCTAATGCTGCCATCAGTCAAGCAATTGGGTCCTCTGGCTATGGGGTGGACATAACACCCAAGCGAAGAAAACTTAAGGAAATAATTTCTGGCAAAGCTACCATAGATCAAGCTGTTTTGACAGGTCAATTCCAACAGGAAAATGATCCAATGGTTGCGACACCTGGTCCATCTGCGTCTGTTGCCTCTGACATTGCCAATGTAACAATTCCAGGGTCTTCAAGATCAACATTCAGGTCCCCATTGGCGGATGCTCTCCAGCCACAGGATGTGAAGTATCTCTGTTCACTTTTTGTTGTTCTATCAGGATTAGCTGCAGAGTCATATGCAGAGTCAAGAGGCAGGGTAGACCAGCAAATGGGGATGAAGAAATCTGAAACTTCTGTTGCTTCATCAGCTGAATTACTGCAAGACAACAATAAAGAAGTCCACAAGCCTGTTGTTGATGATCATGCAAAGAAAAATGGAGCAGAGAGAAGTGGAACTAGTGATTCTGGGTCAGAAGGAGTTGATATACAGAACTACAGGAGGCCGTTGTCACCGGGAACGCTAGCATTGATGTGTGATGAACAAGATGAGATTTTTCTTTCGAATAGTGCTGCCAATGCTGTGGTTTGCAATGATCAAAAAATGATTCATAAGTCATCAAATTCTGATGTTTACATGGACATTTATGGAGAGCAGGAACGGCTTGTGCTCACCAGGTTTTGGGACGTTCTCCGAGGACTCATCACTCGCGGAAGCATAAGAGAAGCGATGTGCTTCCCATCAGCCAATAAAGAGGTGGGAAGCAAACAAGAAGCAGCTGATAATGGCAATAATGGAGCTGAAACTGATTTGAGAAGTGACAAGGGGAAGGGAGTTCACATACACAGCAATCGCATAGCAAATTCCCACTTCCCATTAGCCACTAAAGTATCCGAGACAAGTCGTGCAATTCCTAATGGACAAGACAATGATGACCTATCATTGAGGATCGGTCTGCCTACTGGAATTGCTGGGTTAATATAA 1920 0.4484 MEQSETISDLAPRKFVRQLDFTAIGGDSVNVELPRAHESLPHLELPPQTQKPLPQSILRSQSLSPSQIQIEPKLQSQAYTPTQSKLPLRSPGQQLWSSSHTQQQRPPQSQVNQQSQPRPQLVSPVRRIPHPVQKISMATLPLLKQESPSKRPWHNVGSEDSTPKKQKQCNCKNSRCLKLYCECFAAGIHCDGCNCLNCHNNVDNEAAREEAVGIILERNPNAFRPKIASSPQEPQGSKEEAEIQVLGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCMDCKNFEGSEERIALDPMNLKQAANAAISQAIGSSGYGVDITPKRRKLKEIISGKATIDQAVLTGQFQQENDPMVATPGPSASVASDIANVTIPGSSRSTFRSPLADALQPQDVKYLCSLFVVLSGLAAESYAESRGRVDQQMGMKKSETSVASSAELLQDNNKEVHKPVVDDHAKKNGAERSGTSDSGSEGVDIQNYRRPLSPGTLALMCDEQDEIFLSNSAANAVVCNDQKMIHKSSNSDVYMDIYGEQERLVLTRFWDVLRGLITRGSIREAMCFPSANKEVGSKQEAADNGNNGAETDLRSDKGKGVHIHSNRIANSHFPLATKVSETSRAIPNGQDNDDLSLRIGLPTGIAGLI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00640 639 ProSiteProfiles CRC domain profile. 165 288 IPR005172 -
Accr4g00640 639 SMART CXC_2 248 289 IPR033467 -
Accr4g00640 639 SMART CXC_2 164 204 IPR033467 -
Accr4g00640 639 MobiDBLite consensus disorder prediction 563 587 - -
Accr4g00640 639 MobiDBLite consensus disorder prediction 415 477 - -
Accr4g00640 639 MobiDBLite consensus disorder prediction 441 461 - -
Accr4g00640 639 PANTHER TESMIN/TSO1-RELATED 47 549 IPR028307 -
Accr4g00640 639 MobiDBLite consensus disorder prediction 424 440 - -
Accr4g00640 639 MobiDBLite consensus disorder prediction 49 121 - -
Accr4g00640 639 MobiDBLite consensus disorder prediction 40 168 - -
Accr4g00640 639 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 251 285 IPR005172 -
Accr4g00640 639 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 166 201 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00640 Accr-Chr4 6204890 6209539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00640 13 558 CPP Transcription Factor Family AT4G29000 44.071 2.27e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Accr4g00640 TCR 2.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00640 - K21776 gmx:100811459 671.774