LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr4g00636	ATGGCGTCATACTTATCTGCAGCTCTGAATCTCTCTACGGCCAGACATTGTACTTTACCATCACCACGCTCCTTTCGTTTGCCCCCAATTCGAAATTCCTGCTACAAACCTTCTCCTATCCCACAATCCCAGTTATTTGGTGCAAAAGGATCTGAAGTGTTTAAAGGAGATGGACAAGCAATAGAGGCTACTGCTGCGGGAAAACCAGCCCAAGCAAATAGTTCTGTTACCGAACAGAATTTAATGGACTGGGTCAAAAATGACACGCGGAGATTGCTTCATGTTGTATATCGTGTAGGGGACTTGGAGAAGACTATAAAATTCTATACCGAGTGCCTCGGTATGAAGCTATTGAGAAAACGTGATATACCAGAAGAGAGATATACTAATGCCTTTCTTGGATACGGTCCTGAAGATTCCCACTTCACAGTTGAACTTACTTACAATTATGGAGTGGATAAGTATGACATTGGAAATGGTTTTGGTCATTTTGGTATCGCAGTTGAAGATGTTGCCAAAGCAGTAGATTTAATAAAAGCTAAGGGAGGGAAGGTTACCAGGGAAGCAGGACCCGTCAATGGTGGCAGGACAGTCATAGCTTTTATTGAAGATCCTGATGGCTACAAGTTTGAGCTTCTTGAGAGAGGTCCCAGTCCTGAACCATTATGCCAAGTCATGCTTCGAGTAGGTGACCTTGATCGTGCCATAGCCTTCTATAAAAAGGCTTTTGGCATGCAACTTCTCCGGAAAAGGGACAATCCTGAGTACAAGTACACAATAGCCATGATGGGATATGGTCCTGAAGACAAGAATGCTGCTCTAGAACTAACATATAACTATGGGGTCACTAATTATGACAAAGGAAATGGTTATGCACAGATAGCAGTAGGTACAAACGATGTTTATAAGACTGCAGAAGCAATAAAACTTTATGGAGGGAAGATTATCCGTGAACCTGGGCCTTTGCCAGGTATCAACACCAAGATAGTAGCTTGCTTGGATCCTGACGGTTGGAAATCGGTATTTGTTGATAATGTTGATTTCCTGAGGGAATTAGAGTGA	1062	0.4266	MASYLSAALNLSTARHCTLPSPRSFRLPPIRNSCYKPSPIPQSQLFGAKGSEVFKGDGQAIEATAAGKPAQANSSVTEQNLMDWVKNDTRRLLHVVYRVGDLEKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFTVELTYNYGVDKYDIGNGFGHFGIAVEDVAKAVDLIKAKGGKVTREAGPVNGGRTVIAFIEDPDGYKFELLERGPSPEPLCQVMLRVGDLDRAIAFYKKAFGMQLLRKRDNPEYKYTIAMMGYGPEDKNAALELTYNYGVTNYDKGNGYAQIAVGTNDVYKTAEAIKLYGGKIIREPGPLPGINTKIVACLDPDGWKSVFVDNVDFLRELE	353

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr4g00636	353	ProSitePatterns	Glyoxalase I signature 1.	94	115	IPR018146	GO:0004462\|GO:0046872
	Accr4g00636	353	PANTHER	LACTOYLGLUTATHIONE LYASE	73	353	-	-
	Accr4g00636	353	FunFam	Lactoylglutathione lyase	218	353	-	-
	Accr4g00636	353	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	92	212	IPR004360	-
	Accr4g00636	353	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	224	339	IPR004360	-
	Accr4g00636	353	Gene3D	-	64	216	IPR029068	-
	Accr4g00636	353	NCBIfam	lactoylglutathione lyase	91	216	IPR004361	GO:0004462\|GO:0046872
	Accr4g00636	353	Gene3D	-	218	353	IPR029068	-
	Accr4g00636	353	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	222	343	IPR029068	-
	Accr4g00636	353	ProSitePatterns	Glyoxalase I signature 2.	158	170	IPR018146	GO:0004462\|GO:0046872
	Accr4g00636	353	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	91	215	IPR037523	-
	Accr4g00636	353	CDD	GlxI_Ni	92	213	-	-
	Accr4g00636	353	ProSitePatterns	Glyoxalase I signature 1.	224	245	IPR018146	GO:0004462\|GO:0046872
	Accr4g00636	353	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	221	345	IPR037523	-
	Accr4g00636	353	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	90	220	IPR029068	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr4g00636	Accr-Chr4	6166276	6169315	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr4g00636	224	342	Calmodulin-binding Proteins	AT1G08110	28.276	1.01e-10	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr4g00636	K01759		-	cit:102613371	563.148