LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr4g00635	ATGGCGTCATACTTATCTGCAGCTCTGAATCTCTCTACGGCCAGACATTGTACTTTACCATCACCACGCTCCTTTCGTTTGCCCCCAATTCGAAATTCCTGCTACAAACCTTCTCGTAGGCTTACTCTCTTTCACCTCGGAATTGCTATCCCACAATCCCAGTTATTTGGTGCAAAAGGATCTGAAGTGTTTAAAGGAGATGGACAAGCAATAGAGGCTACTGCTGCGGGAAAACCAGCCCAAGCAAATAGTTCTGTTACCGAACAGAATTTAATGGACTGGGTCAAAAATGACACGCGGAGATTGCTTCATGTTGTATATCGTGTAGGGGACTTGGAGAAGACTATAAAATTCTATACCGAGTGCCTCGGTATGAAGCTATTGAGAAAACGTGATATACCAGAAGAGAGATATACTAATGCCTTTCTTGGATACGGTCCTGAAGATTCCCACTTCACAGTTGAACTTACTTACAATTATGGAGTGGATAAGTATGACATTGGAAATGGTTTTGGTCATTTTGGTATCGCAGTTGAAGATGTTGCCAAAGCAGTAGATTTAATAAAAGCTAAGGGAGGGAAGGTTACCAGGGAAGCAGGACCCGTCAATGGTGGCAGGACAGTCATAGCTTTTATTGAAGATCCTGATGGCTACAAGTTTGAGCTTCTTGAGAGAGGTCCCAGTCCTGAACCATTATGCCAAGTCATGCTTCGAGTAGGTGACCTTGATCGTGCCATAGCCTTCTATAAAAAGGCTTTTGGCATGCAACTTCTCCGGAAAAGGGACAATCCTGAGTACAAGTACACAATAGCCATGATGGGATATGGTCCTGAAGACAAGAATGCTGCTCTAGAACTAACATATAACTATGGGGTCACTAATTATGACAAAGGAAATGGTTATGCACAGATAGCAGTAGGTACAAACGATGTTTATAAGACTGCAGAAGCAATAAAACTTTATGGAGGGAAGATTATCCGTGAACCTGGGCCTTTGCCAGGTATCAACACCAAGATAGTAGCTTGCTTGGATCCTGACGGTTGGAAATCGGTATTTGTTGATAATGTTGATTTCCTGAGGGAATTAGAGTGA	1092	0.4277	MASYLSAALNLSTARHCTLPSPRSFRLPPIRNSCYKPSRRLTLFHLGIAIPQSQLFGAKGSEVFKGDGQAIEATAAGKPAQANSSVTEQNLMDWVKNDTRRLLHVVYRVGDLEKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFTVELTYNYGVDKYDIGNGFGHFGIAVEDVAKAVDLIKAKGGKVTREAGPVNGGRTVIAFIEDPDGYKFELLERGPSPEPLCQVMLRVGDLDRAIAFYKKAFGMQLLRKRDNPEYKYTIAMMGYGPEDKNAALELTYNYGVTNYDKGNGYAQIAVGTNDVYKTAEAIKLYGGKIIREPGPLPGINTKIVACLDPDGWKSVFVDNVDFLRELE	363

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr4g00635	363	ProSitePatterns	Glyoxalase I signature 1.	104	125	IPR018146	GO:0004462\|GO:0046872
	Accr4g00635	363	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	231	355	IPR037523	-
	Accr4g00635	363	ProSitePatterns	Glyoxalase I signature 2.	168	180	IPR018146	GO:0004462\|GO:0046872
	Accr4g00635	363	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	100	230	IPR029068	-
	Accr4g00635	363	FunFam	Lactoylglutathione lyase	228	363	-	-
	Accr4g00635	363	NCBIfam	lactoylglutathione lyase	101	226	IPR004361	GO:0004462\|GO:0046872
	Accr4g00635	363	CDD	GlxI_Ni	102	223	-	-
	Accr4g00635	363	Gene3D	-	228	363	IPR029068	-
	Accr4g00635	363	ProSitePatterns	Glyoxalase I signature 1.	234	255	IPR018146	GO:0004462\|GO:0046872
	Accr4g00635	363	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	102	222	IPR004360	-
	Accr4g00635	363	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	234	349	IPR004360	-
	Accr4g00635	363	PANTHER	LACTOYLGLUTATHIONE LYASE	83	363	-	-
	Accr4g00635	363	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	232	353	IPR029068	-
	Accr4g00635	363	Gene3D	-	74	226	IPR029068	-
	Accr4g00635	363	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	101	225	IPR037523	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr4g00635	Accr-Chr4	6166276	6169315	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr4g00635	234	352	Calmodulin-binding Proteins	AT1G08110	28.276	1.10e-10	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr4g00635	K01759		-	cit:102613371	585.874