Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00632 ATGCCAAAGATGAGTGGGTGTTTGGTGGTGTTCGTTATGATTCTTTCATTGCCGTTGGATGTGAAATCCCAGGGAGCACCAGAGAGCATGCAAGATAATATGCCTCAAAACATCCATCCAAGTAAAGGAGTTATAATAGCAATCCTCACTGTTATGTTTGTGATATCATTTCTCCTTATGGCTTATGTAAAGTTCTGTAAAATCCGGTCCCCTGATTCCCTTAACCTAGATATGAACGATCGGGGAATAGGCCAATCCAGGTCAGGATATTCCGGGATAGACAAACAAGTAATCGAATCACTGCCTTTTTTCAAGTTCTCTTCCCTCAAGGGCTCAAAAGAAGGCCTAGAATGTGCCGTTTGCTTGTCGAAATTCGACGACGCCGAGGTTCTTAGGTTGCTGCCCAAGTGTAAGCATGCTTTTCACATGAATTGCATCGACAAGTGGCTTGAATATCACTCGACATGTCCCCTTTGCAGGTACAAGGTTGACCCTGAGGACATCAAGACATTCAATTCCTCCATCAGCTCCAGGTTCCTTCGAGTTCCTTCCGACATAACAGAGGTCCCTGAACTTGAAATCTCCGTCCAGAGGGATCAATCGAACCAGAACTCAAACATATTTAACAATCGGAAACCTGCGCACAGGCTCAATCATAAAATAGTCATATCCGATGTTGCTACGAGGAGCAGGTGGAGTGATCTGAATTCCTCGGACTTGCTGTCGTTGAATTCTGAGATTCTCAGTGCGATGTCAAGCGCGACATTCTCTGGTTCCAACGAGGAAGACAACTCGTTTACGTTGTTGACTGGTCCAGGAGAGAAGAGATCTATGTCGGAGATTGCCAACGTGGCGAGATTTGCAGAAATTAGAGCGGAGAACAATGTGAGAGAAGAGAGAGTGAGAAGGATTTGGTTGCCGATGGTGGAGCGAACAGTGCAGTGGTTTGCGGGACGAGAGAGCGTATTATCGACAGAGTCGAAACACAAAGGATTTGCTTCAAATGTTTGA 1011 0.455 MPKMSGCLVVFVMILSLPLDVKSQGAPESMQDNMPQNIHPSKGVIIAILTVMFVISFLLMAYVKFCKIRSPDSLNLDMNDRGIGQSRSGYSGIDKQVIESLPFFKFSSLKGSKEGLECAVCLSKFDDAEVLRLLPKCKHAFHMNCIDKWLEYHSTCPLCRYKVDPEDIKTFNSSISSRFLRVPSDITEVPELEISVQRDQSNQNSNIFNNRKPAHRLNHKIVISDVATRSRWSDLNSSDLLSLNSEILSAMSSATFSGSNEEDNSFTLLTGPGEKRSMSEIANVARFAEIRAENNVREERVRRIWLPMVERTVQWFAGRESVLSTESKHKGFASNV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00632 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 168 IPR013083 -
Accr4g00632 336 Pfam Ring finger domain 117 160 IPR001841 -
Accr4g00632 336 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 320 - -
Accr4g00632 336 CDD RING-H2_EL5-like 117 160 - -
Accr4g00632 336 FunFam RING-H2 finger protein ATL43 93 167 - -
Accr4g00632 336 SMART ring_2 118 159 IPR001841 -
Accr4g00632 336 SUPERFAMILY RING/U-box 96 165 - -
Accr4g00632 336 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00632 Accr-Chr4 6162709 6163719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00632 40 320 C3H Transcription Factor Family AT2G20030 38.643 1.47e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00632 K10664 - gmx:100816668 329.717