Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00626 ATGACTGCAGAAGCCCAGAATTCTGAAACAGAGAGCACATCAAACTCAAGCTCATTCCCATCTTCCCCTACCTCCCCACACTCTCCTCCTTCGGCTCTTCCTCTCCAAAACTCTGTTTCGAAAGCTAAAGCTGAAAGCCCGGAATCTAAAAAAGTGAAGAGAATTCGAGACTCCAGCAAGCACCCAGTGTACAGAGGGGTCCGTATGCGAAATTGGGGTAAATGGGTGTCTGAAATTCGTGAGCCTCGAAAGAAATCGCGAATATGGCTGGGTACATTTCCGACGCCGGAAATGGCAGCCAGAGCACATGACGTCGCCGCTCTGAGCATCAAAGGCACCTCTGCTATTCTCAATTTCCCCGAGCTCATCGACCTTCTTCCTCGTCCGGCGTCGGTCGCTCCTCGAGACGTACAGGCGGCGGCGGCGAAGGCTGCTCAGATGCATAAGTTCGACCTGCCGACATCATCGTCTTCTTCATCACTGTCGTCGCTGGTTTCAGCAATGGACTTGGGAACAGAGTCGGAGGAACTGAGCGAGATAACAAAGCTGCCAAACTTGGAAACGAGCAACGACAAGGCGGTGGAATTGATGAAGGAGTTTGTGTACGTGGACTCGGAAGAAGGATGGATATACGAGCCACCATGGTTACAGAGCATGGAGGATTGTGACGGGTATGTCGCCGATCAGCTGTGGAATTACTGA 702 0.5185 MTAEAQNSETESTSNSSSFPSSPTSPHSPPSALPLQNSVSKAKAESPESKKVKRIRDSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTSAILNFPELIDLLPRPASVAPRDVQAAAAKAAQMHKFDLPTSSSSSSLSSLVSAMDLGTESEELSEITKLPNLETSNDKAVELMKEFVYVDSEEGWIYEPPWLQSMEDCDGYVADQLWNY 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00626 233 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Accr4g00626 233 SUPERFAMILY DNA-binding domain 63 121 IPR016177 GO:0003677
Accr4g00626 233 MobiDBLite consensus disorder prediction 1 22 - -
Accr4g00626 233 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Accr4g00626 233 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Accr4g00626 233 MobiDBLite consensus disorder prediction 44 61 - -
Accr4g00626 233 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Accr4g00626 233 MobiDBLite consensus disorder prediction 1 61 - -
Accr4g00626 233 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Accr4g00626 233 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Accr4g00626 233 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Accr4g00626 233 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Accr4g00626 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00626 Accr-Chr4 6127188 6127889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00626 37 225 AP2-EREBP Transcription Factor Family AT5G11590 65.500 5.51e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr4g00626 AP2 3.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00626 K09286 - qsa:O6P43_015497 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00626 4 6127188 6127889 Accr4g00626 4 6127188 6127889 ECH