Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00612 ATGATGGCTGTGAGTAAAGAGGGAAGCAAGGTGGGAATGGACAACGGCAAGTATGTGAGGTACACGCCGGAGCAGGTTGAAGCTCTGGAGAGGCTTTATCATGAATGTCCTAAGCCCAGTTCCATGCGTCGCCACCAGCTCATCAGAGAATGTCCCATTCTCTCTAATATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGAGGAAGGAATCGTTACGGCTGCAAGCTGTGAACAGGAAGCTGACGGCCATGAATAAGCTGCTGATGGAGGAAAATGAGAGACTGCAGAAGCAAGTGTCGCGGCTGGTTTATGAGAACAGCTTTTTCCGCCAACAGACACAGAATGCGACTCTTGCTACGACGGACACAAGCTGTGAGTCGGTGGTAACCAGCGGTCAGCACCATGTGACCCCTCAGCATCCACCAAGGGATGCCAGCCCTGCTGGACTTTTGTCCATCGCAGAGGAGACGTTAGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGATTGCCCTGGAATGGCAGCACGAGCCTGCGGCCTTGTGGGTCTGGAACCTACCAGGGTTGCGGAAATACTCAAAGATACGCCCTCGTGGTTTCGTGATTGCCGAGCCTTGGACGTTCTGAATATGATGCCCACTGGAAATGGGGGAACCATTGAAATGCTTTACATGCAGTTGTATTCACCAACAACTTTGGCTCCTGCTCGTGACTTTTGGTTGCTGCGCTACACATCTGTTTTGGAGGACGGCAGTCTAGTGGTCTGTGAAAGATCACTTAACAACATCCAGAATGGACCTACAGTGCCACCAGTGCAGAACTTTGTTAGGGCAGAGATGCTGCCTAGCGGGTATCTGATTAGACCTTGTGAAGGGGGCGGATCCATTATTCATATTGTTGATCATATGGACTTAGAGCCCTGGAGTGTCCCTGAGGTATTGCGCCCACTTTACGAGTCATCAACGCTGCATGCTCAAAAGACAACAATGGCGGCCTTACGTCATTTGAGGCAGATCTCTCAAGAAGCTTCTCAACCAAATGTCTCCGGATGGGGGCGAAGGCCAGCAGCTCTACGTGCACTTAGCCAGCGATTGAGCAAGGGATTCAATGAAGCAGTCAATGGGTTTGCAGATGATGGCTGGTCCATGTTAGAAAGTGATGGCATTGATGATGTCACCCTTCTGGTGAATTCATCTCCCAACAAAATGGTGGGAGTCAATTTTGTTCAGAGCAATGGATTTCCTTATATGAGCACTTCCGTGCTATGTGCCAAAGCATCAATGCTGTTACAGAATGTACCTCCAGCAATTCTTCTCAGATTCTTGCGGGAGCACAGATCAGAGTGGGCAGATAGCAGTATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCCAGTTGCTTGCCTGGAGCCCTAGCAGGAAGTTTTGGGGGTCAGGTTATTCTGCCTCTGGCTCACACTATTGAGCATGAAGAGTTCATGGAGGTCATCAAGTTTGAAAACATGGGTTACTACCGGGATGACATGACTATACCTGAGGATGTTTTCCTCTTGCAACTTTGTAATGGAGCAGATGAGCATGCAAATGGTTCCTATGCAGAACTCATTTTTGCTCCTATTGATGCATCTTTCTCAGATGATGCACCTATATTGCCTTCTGGTTTTCGCATCATAGCTCTCAATTCTAACCCGGATGCTTCAAGTTCAAATCGTACACTTGATCTTGCTTCTGCTCTTGAAGTTAAAACCACAGCAAACAAAGCAGGCACTGGCAGTGACAATAATGGTAACACAAAATCTGTGATGACAATGGCATTCCAATTTGCATTTGAAGTCCACCTTCAGGACAGCATAGCCTCTATGGCCCGGCAGTATGTCCGCAGCATCATTGCATCTGTTCAAAGGGTTGCATTAGCACTCTCCCCTTTGCATTTTGGTTCTCCTAATGGTTTGCATGCTCCAACTGGGCCTCCTGAGGCGCAAACACTTGCTCGTTGGATTTGTCAAAGCCATAGATGCTATCTAGGGGTAGAACTGCTAAAATGTGAAGGCAGTGAATCCATTCTCAAATCCCTTTGGCATCACTCAGATGCGGTCCTGTGCTGCTCTTTGAAGGCATTACCCACGTTCACATTCGCTAATCAAGCTGGACTTGACATGCTTGAGACAACTTTGGTGGCTCTTCAAGACATCACTCTGGAAAAAATCTTTGACGATAGTGGAAAGAAAACCCTTTTCTCTGAGTTCCCCCATATAATGCAACAGGGATTTATGTGCATGCAAGGTGGGATCTGCTTATCCAGCATGGGAAGGCCAGTGTCGTATGAGAGGTTAGTGGCATGGAAAGTGTCGAACGAAGAAGAAGTGGCCCAATGCATATGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2508 0.4805 MMAVSKEGSKVGMDNGKYVRYTPEQVEALERLYHECPKPSSMRRHQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESLRLQAVNRKLTAMNKLLMEENERLQKQVSRLVYENSFFRQQTQNATLATTDTSCESVVTSGQHHVTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHDCPGMAARACGLVGLEPTRVAEILKDTPSWFRDCRALDVLNMMPTGNGGTIEMLYMQLYSPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNIQNGPTVPPVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEASQPNVSGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPNKMVGVNFVQSNGFPYMSTSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPSCLPGALAGSFGGQVILPLAHTIEHEEFMEVIKFENMGYYRDDMTIPEDVFLLQLCNGADEHANGSYAELIFAPIDASFSDDAPILPSGFRIIALNSNPDASSSNRTLDLASALEVKTTANKAGTGSDNNGNTKSVMTMAFQFAFEVHLQDSIASMARQYVRSIIASVQRVALALSPLHFGSPNGLHAPTGPPEAQTLARWICQSHRCYLGVELLKCEGSESILKSLWHHSDAVLCCSLKALPTFTFANQAGLDMLETTLVALQDITLEKIFDDSGKKTLFSEFPHIMQQGFMCMQGGICLSSMGRPVSYERLVAWKVSNEEEVAQCICFMFINWSFV 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00612 835 Gene3D - 191 376 IPR023393 -
Accr4g00612 835 SUPERFAMILY Homeodomain-like 16 78 IPR009057 -
Accr4g00612 835 Gene3D - 9 81 - -
Accr4g00612 835 Pfam MEKHLA domain 694 834 IPR013978 -
Accr4g00612 835 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Accr4g00612 835 Coils Coil 82 113 - -
Accr4g00612 835 Pfam START domain 161 369 IPR002913 GO:0008289
Accr4g00612 835 SMART HOX_1 14 80 IPR001356 GO:0003677
Accr4g00612 835 CDD homeodomain 17 77 IPR001356 GO:0003677
Accr4g00612 835 ProSiteProfiles START domain profile. 151 365 IPR002913 GO:0008289
Accr4g00612 835 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Accr4g00612 835 SUPERFAMILY Bet v1-like 160 372 - -
Accr4g00612 835 CDD bZIP 69 108 - -
Accr4g00612 835 FunFam Homeobox-leucine zipper protein REVOLUTA 17 72 - -
Accr4g00612 835 SMART START_1 160 370 IPR002913 GO:0008289
Accr4g00612 835 CDD START_ArGLABRA2_like 155 370 - -
Accr4g00612 835 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 13 835 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00612 Accr-Chr4 6002084 6007756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00612 13 835 Homeobox Transcription Factor Family AT4G32880 78.356 0.0 1341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr4g00612 START 1.1e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00612 K09338 - zju:107420449 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00612 4 6002084 6007756 Accr4g00612 4 6002084 6007756 ECH