Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00611 ATGGCCAAAGGAGTTCATCATCAGTTTCCAAGGTGCCTCACGTTCATATGCCTTGTCATGTTGGTTTCTAATCTTAATTCCACACAATCACATGGAGATCAACAAGAACAAGAACTTGAGCTTCTGTTGTCCTTCAAAGCTTGCGCCAAGGACTCAAGTCAGTCTCTTTCGAACTGGCTCAATTCTTCAGCCACCTTCTGTAACTGGCATGGCCTCGCCTGCGACCAAACCTCTTCTCACGTTAACTCCATCCAACTCTCAGGTAAAAACATGTCCGGCACTATTTCCTCCTCCATATTTCATCTCCCAAAAGTTACAAACATCGACCTCTCCAGCAATCAGTTCGCTGGTGAAATTTCTTTCTCCTTTCCTTCTTCGTCTCTCTCGTCACTTCTTTACCTCAATCTCAGCAACAACAACCTAACTGGCTCGTTGCCTGAGTTCTTATTTTCCGTGTCGTTTTCCGGCCTTGAATCCTTGGATCTCTCAAACAACATGTTTTCGGGGATAATTCCACATCAGCTTGGTCTTCTTTCGAGTCTAAAATATCTTGACGTGGGAGGGAACGTTCTGGTTGGAAGAATTCCAAGTTCCATCACCAACATCACAGGTTTAGAATACTTGACATTGGCTTCCAACCAGTTAATAGGTGAAATCCCACGTGACATAGGTGTCATGAAGAGCTTGAAGTGGATTTACATGGGTTACAACAATCTCTCTGGCGAAATCCCCAAAAGCATAGGCAACTTATTGTCCCTGCGTCATCTCGATCTTGTCTACAACAATCTCACAGGATTGATTCCTGATTCTCTTGGAAACCTCACCAGTCTTGAGTTTCTGTTTCTCTACAGAAACAACTTCATGGGTTGGATTCCTGCTTCCATTTTCGACCTGAAAAATCTTGTTTCGCTTGATCTCAGTGATAATTATCTCCGGGGAGAAATTTCTGAACTTGTGGTTAACCTTCAAAGACTAGAGATTCTTCAGCTTTTCTCAAATAACTTTACCGGAAAGATTCCAAAGGCTTTAACAGCTTTACCTCGGCTTCAAGTTCTTCAACTGTGGTCCAACAGATTAACGGGCGAGATTCCAAAAGAGCTTGGAATGCATAACAACCTCACTGTTCTAGACCTTTCCACCAACAACCTCTCCGGAGAGATCCCACATGGTTTATGTGATTCAAGGAATCTTAACAAGCTCATTCTTTTTTCCAACTCTCTTGAAGGTCAAATCCCTCACAGTTTGAGCTCCTGTATAACCCTCCGCCGAGTACGCCTCCAGAACAACAAGCTTTCCGGCCAATTAACTCCGGAATTCACCAAGCTGCCACAGGTATACTTGTTAGACATGTCTGGCAACAAACTTTCCGGGCGGATCGATGACCGGAAGTGGGACATGCCGGCGCTTCAGTTACTGAATTTGGCTAAAAACAATTTCTCAGGAGAGTTACCGGACTCTTTTGGGAGTAACGAACTGGAGAACCTGGACTTATCGGAGAACCAGTTTTCAGGTGATATTCCACGTGGCATGGGAAGCTTATCGGAGCTGGTGCAGTTGAAGCTGAGCAGAAACAGGCTGTCAGGTAACATCCCAAATGAACTTTCTTGGTGCAAGAAACTTGTGTCTTTAGACCTCAGTCACAATCAGCTTACCGGTCAAATACCGATTAGTATTGGAGACATGCCAGTTCTAGGGATGCTTGATCTGTCTGAAAACCAATTGAGAGGTGAAATTCCGCAAAATTTAGGGAGTGCTGAGTCACTTGTAGAGCTCAACATATCCTACAACCGTTTTCACGGGAGGTTACCGTCCACCGGAGCTTTCCTCGCCATTAATAGCAGTGACGTCACTGGGAACGACCTTTGTGAGAGTGATGACATCAGTGCGAGTAGAAGCGGTTTACTACCCTGCAACAAAAGAGAAGATAATAATAAGAACCCATTTTGGTGGTTTTTTCTGCTTGGTCTCGTAGGGTTCCCCCTTGCAGCTTTTCTTATTGTCGTCTTCATACGTAGAAGACAGAACTTGGAGGTGACGACAACAAGGGTTGAAAATGAAGAAGGCACATGGGAAATGAGATACTTTGACTCCGAGGCTTCAAAAATCATCACCATCCACGACGTATTATCTTCTGCAAAAGAAGGAGTACTCATAATCACTCAAGGACGAAAGGAGACAGTGAAATTCGAGGTGAAAGAGATGAGTGACCTAAATTGCTTCTCGGAGGACATTGGAAAGCTTCGGCATCCAAATATGGTTAAGTTGATGGGAATATGCAGGTGTGGGAAAGGAGGGTACTTGGTGTATGAGAATGTGGATGGGAAATATTTAAGCCACGTCGTTGGGAGTTTAAGCTGGGAACGACGACGGAATATTGCACTTGGAATTGCAAAAGCACTCAAGTATTTGCATGCTCATGGTTCATCGTTTGCTGGTTTGGTAGGTGAGATGTCACCCCATAGAGTTGTGGTGGACTCAAAAGATGTTCCTCGTCTCATGTTGTGCCCTCTCAAGGTTTCCATTTCTTCACCTTACGTTGCTCCTGAATCGAGAAATGCGAAGGAGGTGACAGAGAAGAGTGACATGTACGGACTCGGTGTTATTCTGATAGAATTATTGACGGGGAGAAGTTCAGTGGACGAAGAAGTGGGCATGCAACACGAGAGCATAGTGGAGTGGGCCCGTTATTGTTATTCGGACTGTCATCTGGATACATGGGTCGACCCGAACATGAAGGGTGGGATTGCCTCGTTAGTTCAAAACGACATCGTTGAGGTCATGAACCTGGCCCTCCAGTGCACAGCCACTGACCCGACAGCCAGGCCGAGCGCTGGCCACGTGTTCAAAACCCTAAACGCTCTGACTGCCTCCACATCATCCTGTGTTTAA 2889 0.4531 MAKGVHHQFPRCLTFICLVMLVSNLNSTQSHGDQQEQELELLLSFKACAKDSSQSLSNWLNSSATFCNWHGLACDQTSSHVNSIQLSGKNMSGTISSSIFHLPKVTNIDLSSNQFAGEISFSFPSSSLSSLLYLNLSNNNLTGSLPEFLFSVSFSGLESLDLSNNMFSGIIPHQLGLLSSLKYLDVGGNVLVGRIPSSITNITGLEYLTLASNQLIGEIPRDIGVMKSLKWIYMGYNNLSGEIPKSIGNLLSLRHLDLVYNNLTGLIPDSLGNLTSLEFLFLYRNNFMGWIPASIFDLKNLVSLDLSDNYLRGEISELVVNLQRLEILQLFSNNFTGKIPKALTALPRLQVLQLWSNRLTGEIPKELGMHNNLTVLDLSTNNLSGEIPHGLCDSRNLNKLILFSNSLEGQIPHSLSSCITLRRVRLQNNKLSGQLTPEFTKLPQVYLLDMSGNKLSGRIDDRKWDMPALQLLNLAKNNFSGELPDSFGSNELENLDLSENQFSGDIPRGMGSLSELVQLKLSRNRLSGNIPNELSWCKKLVSLDLSHNQLTGQIPISIGDMPVLGMLDLSENQLRGEIPQNLGSAESLVELNISYNRFHGRLPSTGAFLAINSSDVTGNDLCESDDISASRSGLLPCNKREDNNKNPFWWFFLLGLVGFPLAAFLIVVFIRRRQNLEVTTTRVENEEGTWEMRYFDSEASKIITIHDVLSSAKEGVLIITQGRKETVKFEVKEMSDLNCFSEDIGKLRHPNMVKLMGICRCGKGGYLVYENVDGKYLSHVVGSLSWERRRNIALGIAKALKYLHAHGSSFAGLVGEMSPHRVVVDSKDVPRLMLCPLKVSISSPYVAPESRNAKEVTEKSDMYGLGVILIELLTGRSSVDEEVGMQHESIVEWARYCYSDCHLDTWVDPNMKGGIASLVQNDIVEVMNLALQCTATDPTARPSAGHVFKTLNALTASTSSCV 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00611 962 Gene3D Transferase(Phosphotransferase) domain 1 734 960 - -
Accr4g00611 962 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 395 952 - -
Accr4g00611 962 Pfam Protein tyrosine and serine/threonine kinase 841 949 IPR001245 GO:0004672|GO:0006468
Accr4g00611 962 FunFam Leucine-rich repeat receptor-like kinase 37 155 - -
Accr4g00611 962 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 156 244 - -
Accr4g00611 962 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 330 631 - -
Accr4g00611 962 ProSiteProfiles Protein kinase domain profile. 664 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00611 962 Pfam Leucine rich repeat 539 598 IPR001611 GO:0005515
Accr4g00611 962 Pfam Leucine rich repeat 228 287 IPR001611 GO:0005515
Accr4g00611 962 Gene3D Ribonuclease Inhibitor 298 629 IPR032675 -
Accr4g00611 962 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Accr4g00611 962 Gene3D Ribonuclease Inhibitor 195 294 IPR032675 -
Accr4g00611 962 Gene3D Ribonuclease Inhibitor 34 194 IPR032675 -
Accr4g00611 962 SUPERFAMILY L domain-like 50 386 - -
Accr4g00611 962 SUPERFAMILY Protein kinase-like (PK-like) 745 954 IPR011009 -
Accr4g00611 962 FunFam Leucine-rich repeat receptor protein kinase EMS1 245 329 - -
Accr4g00611 962 ProSiteProfiles Leucine-rich repeat profile. 130 152 IPR001611 GO:0005515
Accr4g00611 962 SMART LRR_typ_2 274 298 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 128 152 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 346 370 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 154 177 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 372 394 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 561 585 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 250 273 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 466 489 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 202 226 IPR003591 -
Accr4g00611 962 SMART LRR_typ_2 513 537 IPR003591 -
Accr4g00611 962 SUPERFAMILY L domain-like 321 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00611 Accr-Chr4 5993086 5996059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00611 38 951 Receptor kinase-like Gene Family AT2G25790 51.609 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Accr4g00611 PK_Tyr_Ser-Thr 2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00611 - - gmx:100777118 1142.87