Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00576 ATGTTCCTCTCTCTCTTCTCTCTCATTTTCTTTCTCTCCGGTGTTCAATCCGACGACCGTCAACTCCTTCTCAACTTGAGATCTTCACTCCAACATGAGTCAAACCCCCCTGTTTTTAACTCCTGGAATTCCACCAACTCCATCTGCAATTTCTACGGGATTTCCTGCAACTCCAACGGTTCGGTGACGGAGATCGATCTTTCTTCTCAAAATCTTTCTGGGGTTCTGCCTCTTGACTCCATTTGCGAGCTCCCTTCTCTGCATAAGCTCGCATTCGGATTCAACTCCTTGCATGGCAGAGTTGCAGAGGATTTGAGAAACTGTGTCAACTTAGTATACTTAGACTTGGGAAACAACGATTTCTCAGGGCCGTTTCCTGATATATCTCCTCTCAGCCAATTGCAATATTTGTTTTTGAACCAGAGTGGATTTTCTGGAACTTTCCCATGGAAGTCCCTGCTAAACATGACGCGTCTCGTGCAGCTAAGTGTTGGAGACAACCCATTTCACATCACACCTTTCCCAACTGAGTTGGTCAATCTTAAAAGCCTCCAATGGCTCTATCTAACGAATTGTAGCCTCGGAGGGGAAATACCAGCAGGAATAGGTAATCTCACTCAGCTTGTAAATTTGGAGTTTTCGGATAATTTTATATCCGGCGAGATTCCTGCAGAGATTGGGAATCTTGGGAAGTTATGGCAGTTGGAGTTCTACAACAACTCAATAACTGGGAAATTTCCAGTCGGGTTCAGAAATCTCACAAGCCTTGCGAAATTGGACGGATCAATTAATCAGCTTGAAGGCGATCTTTCCGAGTTGAAGTTCTTGACAAATCTTGTTTCCCTACAGCTGTTTGAAAATAAGTTAACAGGGGAAATTCCACCTGAGTTCAATGAATTCAAAAAGCTCGTGAATCTCTCTTTGTACACTAATCAATTGTCAGGGCCCATTCCTCAAAAACTTGGCTCTTGGGCAGAGTTTGATTTCATTGACGTGTCAGAGAACATGTTGATGGGTCCTATTCCGCCTTATATGTGCAGCAAAGGAAAGATGCATAAACTACTTGTACTTCAAAACAAGCTCTCTGGGGAAATACCAGCTACGTATGCGAACTGCACAACATTGATTCGGTTCAGAGTCAACGATAACTTGCTTTCGGGGACGATTCCTTCTGGAATATGGGGATTGCCGAACGCGGAGATAATCGATGTCGAACTGAATCAGTTGGAAGGTTCAATTACGTCAGATATAAAGAACGCGAAGGCCTTAGCCGCTTTACGTGCTAAAAGGAACCGCTTGTCCGGTGAGATACCGAGAGAAATTTCAGAAGCAACATCCTTGGTGACAATTGATCTAAGTGAGAATCAGATTTCCGGGGAAATTCCAATGGGTATTGGGGAGCTGAAAAGTTTGAGCAGTCTTTATTTACAGAGGAACAGGTTATCTGGGTCTATACCTGACTCTTTGGGGTTATGTACTTTACTGAGTGATATCGAACTGGCAGAGAATTCATTCTCTGGAAATATACCTTCATCTTTGGGTAATTTACCAGCTCTTAATGCATTGAATTTGTCCCAAAACGAACTCTCTGGTGAGATTCCAGCGAGTTTCACACTCCTCCGGTTGAGCCTCTTTGATCTATCGAACAACCAATTAACAGGTCCAATCCCACAATCTCTCTCAATTCAAGCTTTCAATGGTAGTCTTGATGGAAACCCAGGTCTGTGCACTCTTGACGCGATCAACTCTTTTAGGCCTTGCGCTGCTCATAAAGGCATCCCTAAAAGCGTCCGTACACTCATCATTTGCTTCACAATCGCTTTGATTTTGCTTCTTGTTTGTTTGGCTCTTTACATGAAGCTAAATAAGAAGGAAAAATATCGAGAACGGTCTTTGAAGGAAGAATCATGGGACCTAAAATCCTTCCACGTGCTGAGTTTCACTGAGGACGAGATTCTAGATTCCATTAAGCAAGAGAATCTCATAGGGACAGGAGGATCAGGAAACGTGTACAAAGTCCCACTCTCAAACAGTAAAGTACTCGCCGTTAAGCACATATGGAATATGGATCCTGCTGGCGGGAAGAAGAGCCGGAGTAGTACTCCGATGATCGGAAAGCACAATGGCAAGTCCAAGTCAAGGGAATTTGATGCAGAGGTACGGACACTGAGCTCTATAAGACATGTGAACGTCGTGAAGCTTTACTGCAGCATCACAAGCGAGGATTCTAGCTTGCTTGTTTATGAGTATCTTCCAAATGGAAGCTTATGGGATCGACTTCATGCAAGTGGGAAGATAGAACTAGACTGGAAAAAGAGATGTGAAATCGCACTTGGAGCTGCCAAGGGATTAGAGTACTTACATCACGGGTGTGAGAAGCCAGTGATTCACAGAGACGTCAAATCTAGTAACATTTTGTTGGATGAGTTCATGAAGCCTAGGATTGCTGATTTTGGACTTGCCAAGATTGTTCAGCCCAATGTTAGCCACGATCCTACACAAGTCATTGCAGGAACACATGGGTATATTGCTCCCGAATATGGTTACACATATAAAGTGAACGAGAAAAGTGATGTGTACAGCTTCGGAGTGGTACTGATGGAGCTGATAACAGGGAAAAGGCCAATAGAAGCAGAGTATGGGGAAAACAAAGACATAGTGAGCTGGGTTTGGAGCAAGATGCAGAGGGAAGAGAGCATAATGAGTGTGGTGGATTCTAGAATACAAGATATGTATAAAGAGGAGGCTGTGAAGATGTTGAGAATAGCGATTCTGTGCACGGCAAGGCTTCCTGCTTTAAGGCCTACGATGAGGAGCGTGGTTCAAATGCTTGAGCATGTTGAGCCTTGTAAATTGGTTGGAATTGTCATTAGCAAAGATGGCTCTGAAGAGAAAATGCAGGACCCTCACACGCCTAAGCTCAAGCCAAGCACTTGA 2937 0.4385 MFLSLFSLIFFLSGVQSDDRQLLLNLRSSLQHESNPPVFNSWNSTNSICNFYGISCNSNGSVTEIDLSSQNLSGVLPLDSICELPSLHKLAFGFNSLHGRVAEDLRNCVNLVYLDLGNNDFSGPFPDISPLSQLQYLFLNQSGFSGTFPWKSLLNMTRLVQLSVGDNPFHITPFPTELVNLKSLQWLYLTNCSLGGEIPAGIGNLTQLVNLEFSDNFISGEIPAEIGNLGKLWQLEFYNNSITGKFPVGFRNLTSLAKLDGSINQLEGDLSELKFLTNLVSLQLFENKLTGEIPPEFNEFKKLVNLSLYTNQLSGPIPQKLGSWAEFDFIDVSENMLMGPIPPYMCSKGKMHKLLVLQNKLSGEIPATYANCTTLIRFRVNDNLLSGTIPSGIWGLPNAEIIDVELNQLEGSITSDIKNAKALAALRAKRNRLSGEIPREISEATSLVTIDLSENQISGEIPMGIGELKSLSSLYLQRNRLSGSIPDSLGLCTLLSDIELAENSFSGNIPSSLGNLPALNALNLSQNELSGEIPASFTLLRLSLFDLSNNQLTGPIPQSLSIQAFNGSLDGNPGLCTLDAINSFRPCAAHKGIPKSVRTLIICFTIALILLLVCLALYMKLNKKEKYRERSLKEESWDLKSFHVLSFTEDEILDSIKQENLIGTGGSGNVYKVPLSNSKVLAVKHIWNMDPAGGKKSRSSTPMIGKHNGKSKSREFDAEVRTLSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHASGKIELDWKKRCEIALGAAKGLEYLHHGCEKPVIHRDVKSSNILLDEFMKPRIADFGLAKIVQPNVSHDPTQVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELITGKRPIEAEYGENKDIVSWVWSKMQREESIMSVVDSRIQDMYKEEAVKMLRIAILCTARLPALRPTMRSVVQMLEHVEPCKLVGIVISKDGSEEKMQDPHTPKLKPST 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00576 978 FunFam Receptor-like protein kinase HAIKU2 639 750 - -
Accr4g00576 978 Gene3D Phosphorylase Kinase; domain 1 639 750 - -
Accr4g00576 978 ProSiteProfiles Protein kinase domain profile. 656 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00576 978 Gene3D Transferase(Phosphotransferase) domain 1 751 953 - -
Accr4g00576 978 FunFam Probable inactive receptor kinase RLK902 16 175 - -
Accr4g00576 978 Pfam Leucine rich repeat N-terminal domain 17 57 IPR013210 -
Accr4g00576 978 SMART LRR_typ_2 276 299 IPR003591 -
Accr4g00576 978 SMART LRR_typ_2 468 492 IPR003591 -
Accr4g00576 978 SMART LRR_typ_2 539 567 IPR003591 -
Accr4g00576 978 SMART LRR_typ_2 181 205 IPR003591 -
Accr4g00576 978 SUPERFAMILY L domain-like 56 384 - -
Accr4g00576 978 FunFam Leucine-rich receptor-like protein kinase family protein 176 272 - -
Accr4g00576 978 Gene3D Ribonuclease Inhibitor 12 93 IPR032675 -
Accr4g00576 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Accr4g00576 978 Pfam Leucine Rich Repeat 183 205 IPR001611 GO:0005515
Accr4g00576 978 ProSitePatterns Protein kinases ATP-binding region signature. 662 684 IPR017441 GO:0005524
Accr4g00576 978 Pfam Protein kinase domain 658 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00576 978 MobiDBLite consensus disorder prediction 692 711 - -
Accr4g00576 978 Gene3D Ribonuclease Inhibitor 327 583 IPR032675 -
Accr4g00576 978 FunFam Leucine-rich repeat receptor-like protein kinase TDR 273 589 - -
Accr4g00576 978 SUPERFAMILY Protein kinase-like (PK-like) 647 946 IPR011009 -
Accr4g00576 978 SMART serkin_6 656 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00576 978 Gene3D Ribonuclease Inhibitor 94 324 IPR032675 -
Accr4g00576 978 SUPERFAMILY RNI-like 293 603 - -
Accr4g00576 978 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 944 - -
Accr4g00576 978 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 751 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00576 Accr-Chr4 5688642 5691664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00576 3 960 Receptor kinase-like Gene Family AT1G09970 61.475 0.0 1157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g00576 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00576 - - pcin:129294382 1622.83