Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00575 ATGTCTCCTTCCTTGCGTCCTCCATCCTCCAACATGTTCCTCTCTCTCTTCTCTCTCATTTTCTTTCTCTCCGGTGTTCAATCCGACGACCGTCAACTCCTTCTCAACTTGAGATCTTCACTCCAACATGAGTCAAACCCCCCTGTTTTTAACTCCTGGAATTCCACCAACTCCATCTGCAATTTCTACGGGATTTCCTGCAACTCCAACGGTTCGGTGACGGAGATCGATCTTTCTTCTCAAAATCTTTCTGGGGTTCTGCCTCTTGACTCCATTTGCGAGCTCCCTTCTCTGCATAAGCTCGCATTCGGATTCAACTCCTTGCATGGCAGAGTTGCAGAGGATTTGAGAAACTGTGTCAACTTAGTATACTTAGACTTGGGAAACAACGATTTCTCAGGGCCGTTTCCTGATATATCTCCTCTCAGCCAATTGCAATATTTGTTTTTGAACCAGAGTGGATTTTCTGGAACTTTCCCATGGAAGTCCCTGCTAAACATGACGCGTCTCGTGCAGCTAAGTGTTGGAGACAACCCATTTCACATCACACCTTTCCCAACTGAGTTGGTCAATCTTAAAAGCCTCCAATGGCTCTATCTAACGAATTGTAGCCTCGGAGGGGAAATACCAGCAGGAATAGGTAATCTCACTCAGCTTGTAAATTTGGAGTTTTCGGATAATTTTATATCCGGCGAGATTCCTGCAGAGATTGGGAATCTTGGGAAGTTATGGCAGTTGGAGTTCTACAACAACTCAATAACTGGGAAATTTCCAGTCGGGTTCAGAAATCTCACAAGCCTTGCGAAATTGGACGGATCAATTAATCAGCTTGAAGGCGATCTTTCCGAGTTGAAGTTCTTGACAAATCTTGTTTCCCTACAGCTGTTTGAAAATAAGTTAACAGGGGAAATTCCACCTGAGTTCAATGAATTCAAAAAGCTCGTGAATCTCTCTTTGTACACTAATCAATTGTCAGGGCCCATTCCTCAAAAACTTGGCTCTTGGGCAGAGTTTGATTTCATTGACGTGTCAGAGAACATGTTGATGGGTCCTATTCCGCCTTATATGTGCAGCAAAGGAAAGATGCATAAACTACTTGTACTTCAAAACAAGCTCTCTGGGGAAATACCAGCTACGTATGCGAACTGCACAACATTGATTCGGTTCAGAGTCAACGATAACTTGCTTTCGGGGACGATTCCTTCTGGAATATGGGGATTGCCGAACGCGGAGATAATCGATGTCGAACTGAATCAGTTGGAAGGTTCAATTACGTCAGATATAAAGAACGCGAAGGCCTTAGCCGCTTTACGTGCTAAAAGGAACCGCTTGTCCGGTGAGATACCGAGAGAAATTTCAGAAGCAACATCCTTGGTGACAATTGATCTAAGTGAGAATCAGATTTCCGGGGAAATTCCAATGGGTATTGGGGAGCTGAAAAGTTTGAGCAGTCTTTATTTACAGAGGAACAGGTTATCTGGGTCTATACCTGACTCTTTGGGGTTATGTACTTTACTGAGTGATATCGAACTGGCAGAGAATTCATTCTCTGGAAATATACCTTCATCTTTGGGTAATTTACCAGCTCTTAATGCATTGAATTTGTCCCAAAACGAACTCTCTGGTGAGATTCCAGCGAGTTTCACACTCCTCCGGTTGAGCCTCTTTGATCTATCGAACAACCAATTAACAGGTCCAATCCCACAATCTCTCTCAATTCAAGCTTTCAATGGTAGTCTTGATGGAAACCCAGGTCTGTGCACTCTTGACGCGATCAACTCTTTTAGGCCTTGCGCTGCTCATAAAGGCATCCCTAAAAGCGTCCGTACACTCATCATTTGCTTCACAATCGCTTTGATTTTGCTTCTTGTTTGTTTGGCTCTTTACATGAAGCTAAATAAGAAGGAAAAATATCGAGAACGGTCTTTGAAGGAAGAATCATGGGACCTAAAATCCTTCCACGTGCTGAGTTTCACTGAGGACGAGATTCTAGATTCCATTAAGCAAGAGAATCTCATAGGGACAGGAGGATCAGGAAACGTGTACAAAGTCCCACTCTCAAACAGTAAAGTACTCGCCGTTAAGCACATATGGAATATGGATCCTGCTGGCGGGAAGAAGAGCCGGAGTAGTACTCCGATGATCGGAAAGCACAATGGCAAGTCCAAGTCAAGGGAATTTGATGCAGAGGTACGGACACTGAGCTCTATAAGACATGTGAACGTCGTGAAGCTTTACTGCAGCATCACAAGCGAGGATTCTAGCTTGCTTGTTTATGAGTATCTTCCAAATGGAAGCTTATGGGATCGACTTCATGCAAGTGGGAAGATAGAACTAGACTGGAAAAAGAGATGTGAAATCGCACTTGGAGCTGCCAAGGGATTAGAGTACTTACATCACGGGTGTGAGAAGCCAGTGATTCACAGAGACGTCAAATCTAGTAACATTTTGTTGGATGAGTTCATGAAGCCTAGGATTGCTGATTTTGGACTTGCCAAGATTGTTCAGCCCAATGTTAGCCACGATCCTACACAAGTCATTGCAGGAACACATGGGTATATTGCTCCCGAATATGGTTACACATATAAAGTGAACGAGAAAAGTGATGTGTACAGCTTCGGAGTGGTACTGATGGAGCTGATAACAGGGAAAAGGCCAATAGAAGCAGAGTATGGGGAAAACAAAGACATAGTGAGCTGGGTTTGGAGCAAGATGCAGAGGGAAGAGAGCATAATGAGTGTGGTGGATTCTAGAATACAAGATATGTATAAAGAGGAGGCTGTGAAGATGTTGAGAATAGCGATTCTGTGCACGGCAAGGCTTCCTGCTTTAAGGCCTACGATGAGGAGCGTGGTTCAAATGCTTGAGCATGTTGAGCCTTGTAAATTGGTTGGAATTGTCATTAGCAAAGATGGCTCTGAAGAGAAAATGCAGGACCCTCACACGCCTAAGCTCAAGCCAAGCACTTGA 2970 0.4397 MSPSLRPPSSNMFLSLFSLIFFLSGVQSDDRQLLLNLRSSLQHESNPPVFNSWNSTNSICNFYGISCNSNGSVTEIDLSSQNLSGVLPLDSICELPSLHKLAFGFNSLHGRVAEDLRNCVNLVYLDLGNNDFSGPFPDISPLSQLQYLFLNQSGFSGTFPWKSLLNMTRLVQLSVGDNPFHITPFPTELVNLKSLQWLYLTNCSLGGEIPAGIGNLTQLVNLEFSDNFISGEIPAEIGNLGKLWQLEFYNNSITGKFPVGFRNLTSLAKLDGSINQLEGDLSELKFLTNLVSLQLFENKLTGEIPPEFNEFKKLVNLSLYTNQLSGPIPQKLGSWAEFDFIDVSENMLMGPIPPYMCSKGKMHKLLVLQNKLSGEIPATYANCTTLIRFRVNDNLLSGTIPSGIWGLPNAEIIDVELNQLEGSITSDIKNAKALAALRAKRNRLSGEIPREISEATSLVTIDLSENQISGEIPMGIGELKSLSSLYLQRNRLSGSIPDSLGLCTLLSDIELAENSFSGNIPSSLGNLPALNALNLSQNELSGEIPASFTLLRLSLFDLSNNQLTGPIPQSLSIQAFNGSLDGNPGLCTLDAINSFRPCAAHKGIPKSVRTLIICFTIALILLLVCLALYMKLNKKEKYRERSLKEESWDLKSFHVLSFTEDEILDSIKQENLIGTGGSGNVYKVPLSNSKVLAVKHIWNMDPAGGKKSRSSTPMIGKHNGKSKSREFDAEVRTLSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHASGKIELDWKKRCEIALGAAKGLEYLHHGCEKPVIHRDVKSSNILLDEFMKPRIADFGLAKIVQPNVSHDPTQVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELITGKRPIEAEYGENKDIVSWVWSKMQREESIMSVVDSRIQDMYKEEAVKMLRIAILCTARLPALRPTMRSVVQMLEHVEPCKLVGIVISKDGSEEKMQDPHTPKLKPST 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00575 989 SUPERFAMILY Protein kinase-like (PK-like) 658 957 IPR011009 -
Accr4g00575 989 SMART LRR_typ_2 287 310 IPR003591 -
Accr4g00575 989 SMART LRR_typ_2 479 503 IPR003591 -
Accr4g00575 989 SMART LRR_typ_2 550 578 IPR003591 -
Accr4g00575 989 SMART LRR_typ_2 192 216 IPR003591 -
Accr4g00575 989 Gene3D Ribonuclease Inhibitor 338 594 IPR032675 -
Accr4g00575 989 MobiDBLite consensus disorder prediction 703 722 - -
Accr4g00575 989 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Accr4g00575 989 Pfam Protein kinase domain 669 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00575 989 Gene3D Transferase(Phosphotransferase) domain 1 762 964 - -
Accr4g00575 989 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 762 970 - -
Accr4g00575 989 SUPERFAMILY L domain-like 369 591 - -
Accr4g00575 989 FunFam Receptor-like protein kinase HAIKU2 650 761 - -
Accr4g00575 989 Gene3D Ribonuclease Inhibitor 23 107 IPR032675 -
Accr4g00575 989 Gene3D Ribonuclease Inhibitor 108 335 IPR032675 -
Accr4g00575 989 SMART serkin_6 667 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00575 989 ProSiteProfiles Protein kinase domain profile. 667 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00575 989 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Accr4g00575 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Accr4g00575 989 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 955 - -
Accr4g00575 989 Gene3D Phosphorylase Kinase; domain 1 650 761 - -
Accr4g00575 989 FunFam Leucine-rich receptor-like protein kinase family protein 187 283 - -
Accr4g00575 989 FunFam Leucine-rich repeat receptor-like protein kinase TDR 284 600 - -
Accr4g00575 989 FunFam Probable inactive receptor kinase RLK902 27 186 - -
Accr4g00575 989 SUPERFAMILY L domain-like 67 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00575 Accr-Chr4 5688609 5691664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00575 1 971 Receptor kinase-like Gene Family AT1G09970 61.168 0.0 1162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g00575 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00575 - - pcin:129294382 1626.3