Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00563 ATGGAGAACTATTCCTACTCCTCCTATCCTGATTCGCACGATTCCTCACCTAGGTCTCGCGAAGTCGACATCGAGAACCCATCTTGGGACGAGCCCAACAATAATTCCACCACCAATTACAAAGTCAAGTTCATGTGCAGCTATGGCGGAAAAATCCAACCCAGGCCTCACGATAATCAGCTTGCTTACATCGGCGGGGATACCAAGATCTTAGCGGTTGATCGCAACATCAAGTTCTCGGCTCTCATGTCAAAGCTCTCTTCCCTCTGCGACGCCGACGTTTGCTTCAAGTACCAACTTCCCGGAGAGGATCTCGATGCTTTGATTTCCGTCACCAACGATGAGGATCTAGAGCACATGATGATTGAATACGACCGCTTGTACCGTGCCTCCGCGAAGCCCGCTCGGTTGAGGTTGTTCCTTTTTCCGCTCACTCCGTCAGCTCCGCCCAGTTTTGGGTCGTCCGAATTGAAATCGGAGCGGCAGTGGTTTGTGGATGCTCTCAATTCTGTGCAGATTCAACCGGTGGATGGTTCCTCGCCGCCGGCTCCGGTCTCGGCTACGAACCCGGATTTTCTGTTTGGGTTGGATAAGGCTTACTCGGGGGCTCCTACAACGAAATTGCCCGATTCTGCTTCTGTTTCTTCGGCTCCGGATGTAGCGGCGAAGGATTTGTCAGCGGGATTAGAATGTGTGTCGGAGGATCGGCACGTGGTTGGAGAACCATTGCTCTCCCCCGCTGAGATCCAAAGACAGATCCAGGATTTGCAGAGATTACACATTGTGAACAATGAGCAACTCCTGCAGCGGAAAAGCGATGAAGGTAATGGAAGAGTTTATACTGTGGACTATTTCTCTCATAAAAATCCAGAGAAAGTGGCGCCGGCGGCGCCATCGCATGTACATACAGGTCCAGTTCCTGCGTCGGCAGCGGCAACGTTTTTGCCTGAAAGACATATGACAAGTACTGCTTATCCACTGGGCGCTTCTGTTGCTGGAACTGATCAGCAACAGCCGGTGTATCTCATCCCAGGACCGGCCGGAATGTACCATGCAACTACTTTGCGACCTATGACTGGACCGGTTGGTCAGCCTTACTATGGAGTCCCGAGAATGGTTCCGGCAGAAATGTACAATGCGGCACCGCCGGCGTCTCTTTCACATACCCAAGCCAAAGTTGGGGCTTATACTGAAACTCCTGGAATTATACAGCAGCAGAAGGTTGGGGTGTCTGAACCTGGATATGCCCAGGTGGCCTACGACAATGCTGGCAGGCAGGTCTATTATGCAGCCGCGACATCCGCCCCGCCGCCAGGTGGGGTGGTGCCACCGTACCAGGTGGTTACAGCTGGAATTGATGGCAGACAGCAAGGTGGTGGGGCTTTGAATCAAGAGGGCAAGATTTCTGCTAAAGTTTCTTCTGCTGTCTTTTAG 1434 0.5237 MENYSYSSYPDSHDSSPRSREVDIENPSWDEPNNNSTTNYKVKFMCSYGGKIQPRPHDNQLAYIGGDTKILAVDRNIKFSALMSKLSSLCDADVCFKYQLPGEDLDALISVTNDEDLEHMMIEYDRLYRASAKPARLRLFLFPLTPSAPPSFGSSELKSERQWFVDALNSVQIQPVDGSSPPAPVSATNPDFLFGLDKAYSGAPTTKLPDSASVSSAPDVAAKDLSAGLECVSEDRHVVGEPLLSPAEIQRQIQDLQRLHIVNNEQLLQRKSDEGNGRVYTVDYFSHKNPEKVAPAAPSHVHTGPVPASAAATFLPERHMTSTAYPLGASVAGTDQQQPVYLIPGPAGMYHATTLRPMTGPVGQPYYGVPRMVPAEMYNAAPPASLSHTQAKVGAYTETPGIIQQQKVGVSEPGYAQVAYDNAGRQVYYAAATSAPPPGGVVPPYQVVTAGIDGRQQGGGALNQEGKISAKVSSAVF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00563 477 SUPERFAMILY CAD & PB1 domains 57 149 - -
Accr4g00563 477 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 61 144 - -
Accr4g00563 477 SMART PB1_new 56 144 IPR000270 GO:0005515
Accr4g00563 477 Gene3D - 62 143 - -
Accr4g00563 477 PANTHER OS05G0427100 PROTEIN-RELATED 8 366 - -
Accr4g00563 477 MobiDBLite consensus disorder prediction 1 35 - -
Accr4g00563 477 Pfam PB1 domain 57 143 IPR000270 GO:0005515
Accr4g00563 477 CDD PB1_UP2 45 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00563 Accr-Chr4 5547347 5549458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00563 40 171 MAP Kinase Kinase Kinase AT5G57610 46.667 4.87e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00563 - - pcin:129294124 807.749