Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00509 ATGGCACCCAGTTTCGATTGTGTCTCGACTCTTCTCTGTGCAGAAGACGATAGCATTTTCGACGATAACGATTATGGAGCTACCACGGAGCCCTTAGAGGTTACGTGTGGACTCCATAACCAAAACCTGTGCTTTCATGATCGAGACGACGGGTTGCCATTGCAGAGTGATGAGTGTGTAACGGAAATGGTGCAAAAGGAATGCGACCACTTTCCTGCCGGAGATTACTTGAATAGGCTAAAAACTGCGGATTTGGACTTTGGGGCCAGAAAGGAGGCCGTTGAATGGATTGAAAAGGTACGAGAGCACTTTGGCTTCGGCCCCCTCTGTGAATATCTGTCCATAAACTACCTGGACCGTTTCCTTTCATCATACGAATTACCTAAGGGAAAAAGCTGGACAATGCAATTGTTGGCTGTGGCATGCTTGTCTCTCGCTGTCAAAATGGAAGAGACTGAAGTTCCCCTGTCTATTGATTTGCAGGTGGGCGGATCAAAGTATGTATTTGAAGCGAGAACAATACAAAGAATGGAACTTTTGTTACTAAGCACACTGAGGTGGAGAATGCAAGCCATCACCCCATTTTCCTTCATAGACTATTTTCTGTATAAGGTGAACGATGAACAGAGACCAGAAAGAAGCTCCATAATGCGATCCATCCAAATTATAACGAGCACAGCTAGAGGGGTTGACTTGTTGGAATTCAGGCCCTCGGAAGTTGCAGCGGCAGTGGCAATATGTGTATTGAGGGAAACCCAAACGGTGAATACCGATAAAGCAATTTCACTGATGGGTCAACATGTGAAAAAGGAGAGAGTGGTGGAGTGCTTGAAGGTAATAAAAGAGGTGGCATCGTCAAACAGAAGACCACAGAGTCCAATTGGGGTGTGGGAGGGTGCATTGTGCTTGAGCTATAAAAGCGAAGGATCAAGTAGCTCATATGCGAGTCCTTCACGGTCACGTGATGTCCCAGATCCTAAAAGGAGGAAATTAAACAATAGTCACTGTGGAGAGGGGCTATTGTAG 1026 0.4591 MAPSFDCVSTLLCAEDDSIFDDNDYGATTEPLEVTCGLHNQNLCFHDRDDGLPLQSDECVTEMVQKECDHFPAGDYLNRLKTADLDFGARKEAVEWIEKVREHFGFGPLCEYLSINYLDRFLSSYELPKGKSWTMQLLAVACLSLAVKMEETEVPLSIDLQVGGSKYVFEARTIQRMELLLLSTLRWRMQAITPFSFIDYFLYKVNDEQRPERSSIMRSIQIITSTARGVDLLEFRPSEVAAAVAICVLRETQTVNTDKAISLMGQHVKKERVVECLKVIKEVASSNRRPQSPIGVWEGALCLSYKSEGSSSSYASPSRSRDVPDPKRRKLNNSHCGEGLL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00509 341 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Accr4g00509 341 FunFam D6-type cyclin 186 278 - -
Accr4g00509 341 FunFam D2/4-type cyclin 73 185 - -
Accr4g00509 341 CDD CYCLIN_AtCycD-like_rpt2 192 280 - -
Accr4g00509 341 Gene3D - 73 190 - -
Accr4g00509 341 SMART Cyclin_C_2 192 317 IPR004367 -
Accr4g00509 341 PANTHER CYCLINS 57 286 IPR039361 -
Accr4g00509 341 Pfam Cyclin, C-terminal domain 192 289 IPR004367 -
Accr4g00509 341 SUPERFAMILY Cyclin-like 55 189 IPR036915 -
Accr4g00509 341 Gene3D - 62 277 - -
Accr4g00509 341 Pfam Cyclin, N-terminal domain 59 189 IPR006671 -
Accr4g00509 341 MobiDBLite consensus disorder prediction 307 341 - -
Accr4g00509 341 SMART cyclin_7 95 183 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00509 Accr-Chr4 4917012 4918954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00509 10 260 Core Cell Cycle Gene Families AT5G65420 50.198 3.11e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00509 K18810 - gmx:100803873 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00509 4 4917012 4918954 Accr4g00509 4 4917012 4918954 ECH