Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00505 ATGGGCTATCTTTCTTGTTATGATGCCAAGTCTGCAATCGCCACCTACCAATGCGATCCACTCTGCTGGGACGTAAACACATCCCCAAAAGCAAGGAATTCTAAGCGGAATAAGAAGCTGCCGGGGATCAGAAAGTTTGAGTATTTAGACCTGGTGGCAGCCACAAACGGGTTCTCGGCAGATAGCTTCCTAGGCAAAGGCAGCCAAGGCAGCGTCTACAGAGCAACCCTCGACGACGGCAAGCTCGTGGTTGCCGTCAAAACAACAAAATTAAAAAAACCACCGGCGACATGCCTCCTTAATCACCGGCCCAAACGTACCGGCTGTACCAAGTGTACCAGCCCTGCGGAGAACGAGGTCGAGATTCTCTCCGGATTCCCAAGCTCTCGCCGCATCGTCAACCTCATCGGCTTCAGCACGGACTCAAACCTCAACAAATTGATTGTCGTCGAGTACATGCCCAACGGCTCCCTCCACGTTCTCCTGCACTCCGCGCCCAATCCGCCCGGCTGGGCCCTACGTGTCCGGTTCGCATTGCAGGTGGCAGAAGCGGTTCGGACTCTCCACTCTTCCAATCCGCCAGTGATTCACCGGGACATCAAATCTTCAAACGTTTTAATCGACGCAGACTGGAACGCGAGACTGGGCGATTTTGGCCTCGCTCTCAGGGGGCACGATGCGAATTTTGGCGGGAAGGTCACTCTGCCGGCGGGGACTTTAGGATATCTTGACCCCTGCTATCTCACGCCAGGGGATCTAAGTGAGAAGATCGACGTGTTCAGCTTTGGGATCTTGTTACTGGAGATAATCAGCGGTAGGAACGCAATCGACGTGAAGTACAGCCCACCGTCGGTAGTTGAGTGGGCCGTGCCGTTAATAAAGCAGGGTAAATTTGAGGCAATAGCTGACCCGCGGATGGGGACGCCGTCTGACCCGAGGGTGATAGAAGGGCTGGCGGTGTTGGGGGCGATGTGCGTGAGGTGGAAGGCGGAGAAGAGGCCGACGATGGTGGAGGTAGTGGAGTGCTTAAAACAAGTGAGGAAGAGGATTTATGGGTGGCCAATATGGAGGAGCGTGAAGAGGCGGGTGGGGCGGAGAGAGAAAGCAGAGTCGCTAATAAAGATGGGAAGCAGAAGAAACGGGAAGGTGTTGAGTGTGGGTGTTGCAGAGCATGACACGAGCGAAGCTGGGAATGATCAAGAGGTGAGGTCGAAATCAATTGGTTGTGAAGGGGAGATGAAAATGCAGCGTAATCAGAGTGGAAATACTCAACTTGGCCTGTTGGTAAGAAGGAAGGAGGAAGTGGGACTAAGAAGGTCGAGGTCCGTGGGAGTTTTACACAATCCACGGCTTTCACCTCGGCTGGGCAGAGCTTTATAA 1380 0.5384 MGYLSCYDAKSAIATYQCDPLCWDVNTSPKARNSKRNKKLPGIRKFEYLDLVAATNGFSADSFLGKGSQGSVYRATLDDGKLVVAVKTTKLKKPPATCLLNHRPKRTGCTKCTSPAENEVEILSGFPSSRRIVNLIGFSTDSNLNKLIVVEYMPNGSLHVLLHSAPNPPGWALRVRFALQVAEAVRTLHSSNPPVIHRDIKSSNVLIDADWNARLGDFGLALRGHDANFGGKVTLPAGTLGYLDPCYLTPGDLSEKIDVFSFGILLLEIISGRNAIDVKYSPPSVVEWAVPLIKQGKFEAIADPRMGTPSDPRVIEGLAVLGAMCVRWKAEKRPTMVEVVECLKQVRKRIYGWPIWRSVKRRVGRREKAESLIKMGSRRNGKVLSVGVAEHDTSEAGNDQEVRSKSIGCEGEMKMQRNQSGNTQLGLLVRRKEEVGLRRSRSVGVLHNPRLSPRLGRAL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00505 459 Gene3D Transferase(Phosphotransferase) domain 1 153 351 - -
Accr4g00505 459 Gene3D Phosphorylase Kinase; domain 1 28 152 - -
Accr4g00505 459 SUPERFAMILY Protein kinase-like (PK-like) 41 354 IPR011009 -
Accr4g00505 459 Pfam Protein kinase domain 61 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00505 459 PANTHER OS01G0253100 PROTEIN 36 348 - -
Accr4g00505 459 ProSiteProfiles Protein kinase domain profile. 58 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00505 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Accr4g00505 459 SMART serkin_6 58 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00505 Accr-Chr4 4861430 4862809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00505 44 436 Receptor kinase-like Gene Family AT3G59420 35.075 3.85e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Accr4g00505 Pkinase 6.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00505 - - pcin:129294149 675.626