Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00494 ATGGCACTAGAGGCTGTAGTTTTCTCACAGGATCCCTTCTCGTATAGTTGCTGCAAGGACTCATACTCCTTTGCCGCAGCCTGGAACCCCGGCGAGCATGGCTTCCATGCAGAGGAAGAAAAAGCACCTGTCGAGGTACTCATCAGCAGTAACATGGAACCCAGACATAGCCATGCAACTTGGGATTCTAACTCTTCTCCTGATCAGGCCCGCCGATCACTTCTTTCCCCTGCCCCCACGGGTCGGCGTAAACGACGTCGCACCAAGAGCGCCAAGAACAAGGAGGAGCTTGAGAACCAGAGGATGACTCACATTGCCGTGGAGCGCAATCGACGGAGGCAGATGAATGACTACTTGGCGGTGCTTCGCTCCTTAATGCCTCCATCTTACGTTCAAAGGGGGGACCAGGCTTCTATAATAGGAGGCGCCATTAACTTCGTGAAGGAGCTAGAGCAGCTCTTGCAGTCAATGGAGGGACGAAAGAAGAAGACGAAGCAACAATCAGAGAATTGTAGCTCGCCGTTCGCTGAGTTCTTCACGTTCCCTCAGTACTCCACTAATGCAAATAACGGCAGTACCAGTTCCCAGCAATGGGCCGTCGCAGACATCGAGGTCACCATGGTGGACAGCCACGCCAGCCTCAAGATACTCTCCAAGAAACGTTCCAACCAGCTCACCAAGATCGTCGTCGGCCTTCAAGCCCTCCGCCTCACCGTTCTCCACCTCAACGTCTCCACTCACGACGACATGGCCCTTTACTCTGCTAGCGTCAAGCTTGAAGATGGGTGCGAGCTGAATACGGTGGATGAAATCGCTGCTGCTGTGAATCAATTAATGAGCAGAATCCAAGAGGAAGCGCCTTTCTGA 867 0.5317 MALEAVVFSQDPFSYSCCKDSYSFAAAWNPGEHGFHAEEEKAPVEVLISSNMEPRHSHATWDSNSSPDQARRSLLSPAPTGRRKRRRTKSAKNKEELENQRMTHIAVERNRRRQMNDYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQSMEGRKKKTKQQSENCSSPFAEFFTFPQYSTNANNGSTSSQQWAVADIEVTMVDSHASLKILSKKRSNQLTKIVVGLQALRLTVLHLNVSTHDDMALYSASVKLEDGCELNTVDEIAAAVNQLMSRIQEEAPF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00494 288 Coils Coil 147 167 - -
Accr4g00494 288 SMART finulus 105 156 IPR011598 GO:0046983
Accr4g00494 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 99 150 IPR011598 GO:0046983
Accr4g00494 288 Gene3D - 83 178 IPR036638 GO:0046983
Accr4g00494 288 MobiDBLite consensus disorder prediction 55 73 - -
Accr4g00494 288 Pfam Helix-loop-helix DNA-binding domain 100 151 IPR011598 GO:0046983
Accr4g00494 288 PANTHER MAX DIMERIZATION, MAD 49 285 - -
Accr4g00494 288 FunFam Basic helix-loop-helix transcription factor 90 165 - -
Accr4g00494 288 CDD bHLH_AtFAMA_like 102 166 - -
Accr4g00494 288 MobiDBLite consensus disorder prediction 55 99 - -
Accr4g00494 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 168 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00494 Accr-Chr4 4727723 4728876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00494 1 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.667 1.17e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr4g00494 HLH 3.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00494 - - gmx:100805420 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00423 3 4715998 4717079 Accr4g00494 4 4727723 4728876 CCT
Accr4g00494 4 4727723 4728876 Accr4g00494 4 4727723 4728876 ECH