Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00464 ATGGGAAGGTCTCCGTGCTGTGATGAAAACGGACTTAAGAAAGGACCCTGGACTCCCGAGGAAGACGAAAAGCTTGTCCAATTCATTCAGAAACATGGCCATGGAAGCTGGAGAGCTCTCCCCAAACTTGCTGGTCTCAACAGATGTGGAAAGAGCTGCAGACTAAGGTGGACCAACTATTTAAGACCTGATATTAAGAGGGGCAAATTTTCTCAAGAAGAGGAGCAAACCATTCTCCACCTCCATTCTATCCTTGGAAACAAGTGGTCTGCAATTGCATCCCATCTTCCAGGCAGGACAGATAATGAGATCAAGAATTTCTGGAATACTCATTTGAAGAAGAAGCTGATTCAGATGGGCTTTGACCCAATGACGCATCAGCCAAGAACTGACCTTGTTTCAAGCTTGCCCTACCTTCTGGCTCTGGCCAACATGACTGACCTAATGGATCATCAATCACTGGATGAACAAGCCCTCAAGTTACAAGCAGAGGCAGTACAGTTGGCCAAGCTTGAATACCTTCATTATTTATTCCAATCCACAAGTTCCTTCACTACTACCAACTCCTATGACCAGAGTGCCAGCATGGGTAACATGGAAGCCCTCAATTTGCTAACTTCAATGCCTAATGTCAACGAGAATAATAATGCAGTTATAAACTGCCCATCACAACTGGATAAAGCTTCGTTATTTTCTAACGGGATTGCTGGCCCTCAACCACTCCCCCACCCAAACATGTTATTATCTCAAATTTCAGACCCACAAGTCTCTTTCAATACTTCCCAGCCATGTATGAATAGTGAGAAGAATCAAGCAGGTACCAATAACTTTACAATGATAAGCGGAGGGGATAACATAGCCAATGATGACACTTCATGGATGATCCCATCTATTCAGCCAACTGTGACCTCCTCAAATGGCAATCCTGGAGATGCCAGCAGCCGCACTTCCAGCTATGAAGGAGGAACCTCATCTTATTGGCCCGAACTCTTTTTCGACGACCCAATTCTACATAATGCATGA 1023 0.4467 MGRSPCCDENGLKKGPWTPEEDEKLVQFIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSSLPYLLALANMTDLMDHQSLDEQALKLQAEAVQLAKLEYLHYLFQSTSSFTTTNSYDQSASMGNMEALNLLTSMPNVNENNNAVINCPSQLDKASLFSNGIAGPQPLPHPNMLLSQISDPQVSFNTSQPCMNSEKNQAGTNNFTMISGGDNIANDDTSWMIPSIQPTVTSSNGNPGDASSRTSSYEGGTSSYWPELFFDDPILHNA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00464 340 CDD SANT 69 112 IPR001005 -
Accr4g00464 340 Gene3D - 13 66 - -
Accr4g00464 340 CDD SANT 16 61 IPR001005 -
Accr4g00464 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr4g00464 340 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 249 - -
Accr4g00464 340 Gene3D - 69 116 - -
Accr4g00464 340 FunFam Transcription factor MYB39 69 130 - -
Accr4g00464 340 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr4g00464 340 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr4g00464 340 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr4g00464 340 SMART sant 66 114 IPR001005 -
Accr4g00464 340 SMART sant 13 63 IPR001005 -
Accr4g00464 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr4g00464 340 MobiDBLite consensus disorder prediction 298 322 - -
Accr4g00464 340 FunFam MYB-related transcription factor 13 66 - -
Accr4g00464 340 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr4g00464 340 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00464 Accr-Chr4 4499463 4500682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00464 1 337 MYB Transcription Factor Family AT1G34670 55.014 3.20e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr4g00464 Myb_DNA-binding 2.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00464 K09422 - gmx:100811162 485.337