Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00451 ATGACGAACCAGAACTTGGTTGTTCATGATGTAAAATCATGTATTAACACCATTGTTGAGATGGCTGTGTCCATTTCTAACTTACCTATGCTTACAAGCACGGAAGTACCAGAATCGCTGGTCGTGCTTGATGGGATTTTCGGAAAAAAGATACTGAAGAGGATTGACGATGGAGGAGGAAAAGGTGGAGCCAAAGTCAATGCCTGGATTGATTCAATGAGAGCTTCCTCTCCCACACGAACCAAATCCTCCCTTCCTGTTTCTCAAGACCAACACTTGAGTTCTTGGGCTATTCATCATCCTTCAGCGATCAACATGTTTGATCAGATAATCAATAAATCAAAAGATAAGCAAATAATAATCTTCCTCGACTACGATGGAACTCTCTCCCCAATTGTTGCAGACCCTGATAAAGCATTCATGACTAAGAAGATGAGAGCGACAGTAAAGGATATAGCAAAACACTTCCCCACAGCTATCGTGAGTGGAAGGCGTAGAGACAAGGTTTACAAATTTGTGAGATTAGCAGAGCTGTACTATGCGGGCAGCCATGGCATGGACATCAAAGGACCGACAAAAAGCCAAGGATCTAAGAAAGGTAATCAGGCAGCCCCGTTCCAACCCGCAAGCCAGTTCTTGCCCATGATCAATGAGGTCTACAAGATCTTGTTGGAGAAAACAAAGTGTGTGGAAGGAGCTAAGGTTGAGAATAACAAGTTTTGCTTGTCCGTGCACTTCCGTTGCGTTGACGAAAAGAGCTGGGGTGCACTGGCGGAGCAAGTGCGACTAGTGCTCAATCAGTACCCAAAACTGAAGCTGACGGAAGGCAGAAAAGTGCTTGAGATCCGACCAACCATCAAATGGGACAAGGGTAAAGCTCTTGAGTTTTTGTTACGTTCGCTTGGATTCGCCAATTCCAAGGATGTGTTTCCCATCTACATCGGGGATGACCGAACTGACGAGGATGCTTTTAAGGTGTTACGTAGGAGAGGCCAGGGGGCGGGAATTCTTGTGTCTAAAGTTGCCAAAGAAACAGAAGCTTCCTACACTTTACAGGACCCATCAGAGGTTGAGCAATTTCTGCGGCGTTTGGTAGACTGGAAAAGGGGGAGTAATGAGAGTGGAAGGAGAGTTGAGTAG 1140 0.4553 MTNQNLVVHDVKSCINTIVEMAVSISNLPMLTSTEVPESLVVLDGIFGKKILKRIDDGGGKGGAKVNAWIDSMRASSPTRTKSSLPVSQDQHLSSWAIHHPSAINMFDQIINKSKDKQIIIFLDYDGTLSPIVADPDKAFMTKKMRATVKDIAKHFPTAIVSGRRRDKVYKFVRLAELYYAGSHGMDIKGPTKSQGSKKGNQAAPFQPASQFLPMINEVYKILLEKTKCVEGAKVENNKFCLSVHFRCVDEKSWGALAEQVRLVLNQYPKLKLTEGRKVLEIRPTIKWDKGKALEFLLRSLGFANSKDVFPIYIGDDRTDEDAFKVLRRRGQGAGILVSKVAKETEASYTLQDPSEVEQFLRRLVDWKRGSNESGRRVE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00451 379 FunFam Trehalose 6-phosphate phosphatase 119 205 - -
Accr4g00451 379 Gene3D - 212 378 IPR023214 -
Accr4g00451 379 Gene3D - 119 204 IPR023214 -
Accr4g00451 379 FunFam Trehalose 6-phosphate phosphatase 209 285 - -
Accr4g00451 379 FunFam Trehalose 6-phosphate phosphatase 215 374 - -
Accr4g00451 379 NCBIfam trehalose-phosphatase 117 365 IPR003337 GO:0003824|GO:0005992
Accr4g00451 379 CDD HAD_TPP 121 357 - -
Accr4g00451 379 Pfam Trehalose-phosphatase 122 355 IPR003337 GO:0003824|GO:0005992
Accr4g00451 379 NCBIfam HAD-IIB family hydrolase 120 330 IPR006379 -
Accr4g00451 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 59 373 IPR044651 GO:0004805|GO:0005992
Accr4g00451 379 SUPERFAMILY HAD-like 120 367 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00451 Accr-Chr4 4357701 4359718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00451 115 366 Trehalose Biosynthesis Gene Families AT1G70290 27.138 2.04e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00451 K01087 - gmx:100788641 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00379 3 4177770 4179701 Accr4g00451 4 4357701 4359718 CCT
Accr4g00451 4 4357701 4359718 Accr4g00451 4 4357701 4359718 ECH