Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00422 ATGCGTCCTTCAAAGTCACGTCAAGTTCATCCCGCCCCGGTTCAGGGTTCCCATCTCGCCCCTAATATCTGGCAAGCATGCGCCGGTGGATCCTTTCGAATCCCTCCTGTTCATTCTAGGGTTTATTACTTCCCTCAGGGCCATATTGAGCATGCCTCGTCGGCTCCTCTATACCTTAACCCTCTAATCTTCTACAAGCCCGTCATTCTCTGTCGGGTCTCCGCCATTGAATTTCTTGCCGACCCTGACAGTGAGGAGGTATTTGCCAAGCTTTCGCTCCTTCCTTTGAGTGATCACAGCTCTGATCACTTTCCCGACTCCTTGGAAGCGCCGGACGATGACAAGATTATGTCGTTTGCGAAGGTTCTGACGCCTTCTGACGCGAATAATGGCGGTGGATTCTCTGTTCCTAGGTACTGTGCTGAGACCATCTTTCCGCCTCTGGACTTCTCCAAGTTTGATCGACCCAACCAGGTATTACACGTGACGGACGTTCACGGTAATGTCTGGGACTTTCGCCACATTTATCGGGGCACACCGAGGCGGCACTTGCTCACTACTGGCTGGAGTAAGTATGTCAATAGCAAGAAGTTGGTTGCTGGTGATTCGGTGGTTCTCATGAAGGATTCCAGCGAAAAAATGTTCATCGGTGTTCGCAGAGCTATGCGATCTGCTAAATTAACTGCCGTCGACTGCTCCATATTGTCTTCCCAGCTTGGTGGGGTGGGAAATAAGCCTGAGGGGGAGCGGCAGCAAGAAGGCCATGTAGGTTCCGGAGGGAAAGAAGGGGGGTTTTCAAGGAACGGGAAGGGGAAATTGTCGGCTAAGGAAGTTGCTGATGCTGCAGAATTGGCAGCGCAAGAGATGCCATTTGAGGTTGTGTATTATCCAAGGGTGGGCTGGACGGACTTTGTGGTGAAGGCGGAAGATGTGGAGAAAGCTTGGAATGTTCCATGGACTGCCGGGATGAGAGTTAAAAAGGCAGTGGAGACAGAGGATTCGTCCCGGATCACTTGGTTTCAGGGTACAGTATCTTCTGCATCTTTTCCTGATAATGGACTTTGGCGGAGTTCTCCATGGCGCATGCTTCAGGTTATGTGGGATGAACCTGAAGTCTTGCAGAATGCAAAGCGAGTGAGCCCCTGGGAGGTTGAACTTGTTTCCTCTGCGCTTCCCCCTGATACTGCATTCTCTCCTGCAAAAAGGTTTAGAGCTGCTCATTATTGTGGGGTGGCAACTGATAGAGAGGGAGACCCGTTCTTTTCTAATGCAGGTTTACCTAATTCACCAATGGGGCACTCGAACCCATCATTGTTGAATTACAATACTGTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATCATCTGTACTAAGTCTCTCCAACTCTGGAATTGGTAATTCTCATCTGTATATCGGTAATACATTTGGGAACATGGTACCCATGATGAGAACTTCTATGTCAACAGAGCCAAATATTGATAGTTCTCAGTCTAATAGCTTGTCACCAGAAAGCCAGAGTAATTGGCAGGGGGCAACTGGACTTGTATTATTTGGTACGATCATTCGGTCGGGACAGCCTGTTGAAAGTGGTTCCCATGCTCTTGGGGGCACGGCAGATGAGGGTAGTAATGAAAGTGGTTCCCATGCTCCTGGGGGCACGGCAGATGAGGGTAGTAATGAAAGTGGTTCCCATGCTCTTGGGGGCACGGCAGATGAGGGTAGTAATGAAAGTGGTTCCCATGCTCTTGGGGGCACGGCAGATGAGGGTAGTAATGGCCGCAACGAGACTGAAGAAGGCGTTGGCCAATGA 1815 0.5025 MRPSKSRQVHPAPVQGSHLAPNIWQACAGGSFRIPPVHSRVYYFPQGHIEHASSAPLYLNPLIFYKPVILCRVSAIEFLADPDSEEVFAKLSLLPLSDHSSDHFPDSLEAPDDDKIMSFAKVLTPSDANNGGGFSVPRYCAETIFPPLDFSKFDRPNQVLHVTDVHGNVWDFRHIYRGTPRRHLLTTGWSKYVNSKKLVAGDSVVLMKDSSEKMFIGVRRAMRSAKLTAVDCSILSSQLGGVGNKPEGERQQEGHVGSGGKEGGFSRNGKGKLSAKEVADAAELAAQEMPFEVVYYPRVGWTDFVVKAEDVEKAWNVPWTAGMRVKKAVETEDSSRITWFQGTVSSASFPDNGLWRSSPWRMLQVMWDEPEVLQNAKRVSPWEVELVSSALPPDTAFSPAKRFRAAHYCGVATDREGDPFFSNAGLPNSPMGHSNPSLLNYNTVPAGMQGARQDLSSVLSLSNSGIGNSHLYIGNTFGNMVPMMRTSMSTEPNIDSSQSNSLSPESQSNWQGATGLVLFGTIIRSGQPVESGSHALGGTADEGSNESGSHAPGGTADEGSNESGSHALGGTADEGSNESGSHALGGTADEGSNGRNETEEGVGQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00422 604 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 547 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr4g00422 604 Gene3D - 319 391 - -
Accr4g00422 604 Pfam Auxin response factor 281 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr4g00422 604 Pfam B3 DNA binding domain 119 221 IPR003340 GO:0003677
Accr4g00422 604 ProSiteProfiles B3 DNA-binding domain profile. 119 222 IPR003340 GO:0003677
Accr4g00422 604 MobiDBLite consensus disorder prediction 486 509 - -
Accr4g00422 604 MobiDBLite consensus disorder prediction 538 583 - -
Accr4g00422 604 CDD B3_DNA 118 220 IPR003340 GO:0003677
Accr4g00422 604 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Accr4g00422 604 MobiDBLite consensus disorder prediction 529 604 - -
Accr4g00422 604 FunFam Auxin response factor 117 222 - -
Accr4g00422 604 MobiDBLite consensus disorder prediction 241 270 - -
Accr4g00422 604 SUPERFAMILY DNA-binding pseudobarrel domain 103 227 IPR015300 -
Accr4g00422 604 SMART B3_2 119 222 IPR003340 GO:0003677
Accr4g00422 604 Gene3D - 116 222 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00422 Accr-Chr4 4068206 4071368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00422 21 569 B3 DNA Binding Superfamily AT1G77850 45.000 2.03e-153 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr4g00422 B3 3.5e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00422 - - qsa:O6P43_019702 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00422 4 4068206 4071368 Accr4g00422 4 4068206 4071368 ECH